RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CHMP4BQ9H444 224 aaKnown RBP23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 HDGFL2Q7Z4V5 671 aaPredicted RBP23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 KIF20BQ96Q89 1820 aa23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 C1orf167Q5SNV9 1468 aa23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
HERPUD2-201ENST00000311350 FAM13BQ9NYF5 915 aa23.43■■□□□ 1.34
HERPUD2-201ENST00000311350 JCADQ9P266 1359 aa23.43■■□□□ 1.34
HERPUD2-201ENST00000311350 TMEM57Q8N5G2 664 aa23.43■■□□□ 1.34
HERPUD2-201ENST00000311350 NUCB1Q02818 461 aa23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 CALD1Q05682 793 aaKnown RBP23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 SNX21Q969T3 373 aa23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 R3HCC1Q9Y3T6 440 aaKnown RBP23.42■■□□□ 1.34
HERPUD2-201ENST00000311350 SSFA2P28290 1259 aa23.41■■□□□ 1.34
HERPUD2-201ENST00000311350 RBM25P49756 843 aaKnown RBP23.41■■□□□ 1.34
HERPUD2-201ENST00000311350 SKOR2Q2VWA4 1001 aaPredicted RBP23.41■■□□□ 1.34
HERPUD2-201ENST00000311350 ARID3AQ99856 593 aa23.41■■□□□ 1.34
HERPUD2-201ENST00000311350 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
HERPUD2-201ENST00000311350 RBM42Q9BTD8 480 aaKnown RBP23.4■■□□□ 1.34
HERPUD2-201ENST00000311350 KIF2CQ99661 725 aa23.39■■□□□ 1.34
HERPUD2-201ENST00000311350 PODXL2Q9NZ53 605 aa23.39■■□□□ 1.34
HERPUD2-201ENST00000311350 ATP7BP35670 1465 aa23.39■■□□□ 1.34
HERPUD2-201ENST00000311350 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
HERPUD2-201ENST00000311350 ARHGAP45Q92619 1136 aa23.39■■□□□ 1.33
HERPUD2-201ENST00000311350 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
HERPUD2-201ENST00000311350 CIZ1Q9ULV3 898 aaPredicted RBP23.38■■□□□ 1.33
HERPUD2-201ENST00000311350 SAFB2Q14151 953 aaKnown RBP eCLIP23.37■■□□□ 1.33
HERPUD2-201ENST00000311350 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
HERPUD2-201ENST00000311350 LNPKQ9C0E8 428 aa23.36■■□□□ 1.33
HERPUD2-201ENST00000311350 PLEKHG5O94827 1062 aa23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 DDX49Q9Y6V7 483 aaKnown RBP23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 MINK1Q8N4C8 1332 aaPredicted RBP23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 BMP2KLQ5H9B9 411 aa23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 GCC1Q96CN9 775 aa23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 NHSL1Q5SYE7 1610 aa23.35■■□□□ 1.33
HERPUD2-201ENST00000311350 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
HERPUD2-201ENST00000311350 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
HERPUD2-201ENST00000311350 CDK19Q9BWU1 502 aa23.33■■□□□ 1.33
HERPUD2-201ENST00000311350 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.33■■□□□ 1.32
HERPUD2-201ENST00000311350 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
HERPUD2-201ENST00000311350 ANP32BQ92688 251 aaKnown RBP23.32■■□□□ 1.32
HERPUD2-201ENST00000311350 NFE2L2Q16236 605 aa23.32■■□□□ 1.32
HERPUD2-201ENST00000311350 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
HERPUD2-201ENST00000311350 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
HERPUD2-201ENST00000311350 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
HERPUD2-201ENST00000311350 KIF24Q5T7B8 1368 aa23.3■■□□□ 1.32
HERPUD2-201ENST00000311350 BAG4O95429 457 aaKnown RBP23.3■■□□□ 1.32
HERPUD2-201ENST00000311350 NCLP19338 710 aaKnown RBP23.3■■□□□ 1.32
HERPUD2-201ENST00000311350 MRPL50Q8N5N7 158 aaKnown RBP23.3■■□□□ 1.32
HERPUD2-201ENST00000311350 IFT57Q9NWB7 429 aa23.3■■□□□ 1.32
HERPUD2-201ENST00000311350 UQCRHLA0A096LP55 91 aa23.29■■□□□ 1.32
HERPUD2-201ENST00000311350 K7ELQ4 463 aaPredicted RBP23.29■■□□□ 1.32
HERPUD2-201ENST00000311350 ZBTB7BO15156 539 aaPredicted RBP23.29■■□□□ 1.32
HERPUD2-201ENST00000311350 UQCRHP07919 91 aa23.29■■□□□ 1.32
HERPUD2-201ENST00000311350 KLHL40Q2TBA0 621 aa23.29■■□□□ 1.32
HERPUD2-201ENST00000311350 POLKQ9UBT6 870 aa23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 PTMSP20962 102 aa23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 PRKAR2BP31323 418 aa23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 RBSNQ9H1K0 784 aa23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 CABP1Q9NZU7 370 aa23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
HERPUD2-201ENST00000311350 VAMP4O75379 141 aa23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 GNAI1P63096 354 aa23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 ZNF853P0CG23 659 aa23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 CAVIN1Q6NZI2 390 aaKnown RBP23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
HERPUD2-201ENST00000311350 ABCC4O15439 1325 aa23.26■■□□□ 1.31
HERPUD2-201ENST00000311350 AATKQ6ZMQ8 1374 aa23.26■■□□□ 1.31
HERPUD2-201ENST00000311350 TERF1P54274 439 aa23.26■■□□□ 1.31
HERPUD2-201ENST00000311350 MCTP1Q6DN14 999 aa23.26■■□□□ 1.31
HERPUD2-201ENST00000311350 NPHP3Q7Z494 1330 aa23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 LRP6O75581 1613 aa23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 FMN2Q9NZ56 1722 aa23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 EDC4Q6P2E9 1401 aaKnown RBP23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 GOLGA6L22H0YM25 854 aa23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 PRDM10Q9NQV6 1147 aa23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 NOL7Q9UMY1 257 aaKnown RBP23.25■■□□□ 1.31
HERPUD2-201ENST00000311350 LMOD3Q0VAK6 560 aa23.24■■□□□ 1.31
HERPUD2-201ENST00000311350 CFAP44Q96MT7 982 aa23.24■■□□□ 1.31
HERPUD2-201ENST00000311350 AK9Q5TCS8 1911 aa23.24■■□□□ 1.31
HERPUD2-201ENST00000311350 ZSCAN23Q3MJ62 389 aa23.24■■□□□ 1.31
HERPUD2-201ENST00000311350 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
HERPUD2-201ENST00000311350 FOXO3O43524 673 aa23.23■■□□□ 1.31
HERPUD2-201ENST00000311350 NUTM2BA6NNL0 878 aaPredicted RBP23.22■■□□□ 1.31
HERPUD2-201ENST00000311350 NUTM2EB1AL46 878 aaPredicted RBP23.22■■□□□ 1.31
HERPUD2-201ENST00000311350 MEX3CQ5U5Q3 659 aaKnown RBP23.22■■□□□ 1.31
HERPUD2-201ENST00000311350 NUTM2AQ8IVF1 878 aaPredicted RBP23.22■■□□□ 1.31
HERPUD2-201ENST00000311350 ZNF500O60304 480 aaPredicted RBP23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 ZNF445P59923 1031 aa23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 PKP1Q13835 747 aa23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 TBC1D9Q6ZT07 1266 aa23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 IL13P35225 146 aa23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 RBM27Q9P2N5 1060 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms