RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PPRC1Q5VV67 1664 aaKnown RBP17.89■□□□□ 0.45
COL6A2-202ENST00000310645 RPGRIP1LQ68CZ1 1315 aa17.89■□□□□ 0.45
COL6A2-202ENST00000310645 ADGRB3O60242 1522 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
COL6A2-202ENST00000310645 PIK3R4Q99570 1358 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 MROH1Q8NDA8 1641 aa17.88■□□□□ 0.45
COL6A2-202ENST00000310645 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
COL6A2-202ENST00000310645 MEIS3Q99687 375 aa17.87■□□□□ 0.45
COL6A2-202ENST00000310645 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
COL6A2-202ENST00000310645 MTERF4Q7Z6M4 381 aaKnown RBP17.87■□□□□ 0.45
COL6A2-202ENST00000310645 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
COL6A2-202ENST00000310645 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
COL6A2-202ENST00000310645 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
COL6A2-202ENST00000310645 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
COL6A2-202ENST00000310645 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
COL6A2-202ENST00000310645 GLI2P10070 1586 aa17.86■□□□□ 0.45
COL6A2-202ENST00000310645 CHD1O14646 1710 aa17.86■□□□□ 0.45
COL6A2-202ENST00000310645 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
COL6A2-202ENST00000310645 ANO2Q9NQ90 1003 aa17.85■□□□□ 0.45
COL6A2-202ENST00000310645 ZRANB1Q9UGI0 708 aa17.85■□□□□ 0.45
COL6A2-202ENST00000310645 INO80Q9ULG1 1556 aaPredicted RBP17.84■□□□□ 0.45
COL6A2-202ENST00000310645 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 RPAP2Q8IXW5 612 aaPredicted RBP17.84■□□□□ 0.45
COL6A2-202ENST00000310645 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 CBX1P83916 185 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 FAM135BQ49AJ0 1406 aa17.84■□□□□ 0.45
COL6A2-202ENST00000310645 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
COL6A2-202ENST00000310645 PNPLA6Q8IY17 1366 aa17.83■□□□□ 0.45
COL6A2-202ENST00000310645 TRIM6-TRIM34B2RNG4 842 aa17.83■□□□□ 0.45
COL6A2-202ENST00000310645 BRD1O95696 1058 aa17.83■□□□□ 0.45
COL6A2-202ENST00000310645 IDI1Q13907 227 aa17.83■□□□□ 0.45
COL6A2-202ENST00000310645 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
COL6A2-202ENST00000310645 EXOC6BQ9Y2D4 811 aa17.83■□□□□ 0.44
COL6A2-202ENST00000310645 USP48Q86UV5 1035 aa17.82■□□□□ 0.44
COL6A2-202ENST00000310645 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL6A2-202ENST00000310645 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
COL6A2-202ENST00000310645 NOLC1Q14978 699 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL6A2-202ENST00000310645 MYRIPQ8NFW9 859 aa17.81■□□□□ 0.44
COL6A2-202ENST00000310645 PPLO60437 1756 aa17.81■□□□□ 0.44
COL6A2-202ENST00000310645 PDE1AP54750 535 aa17.81■□□□□ 0.44
COL6A2-202ENST00000310645 DTNBO60941 627 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 MSH6P52701 1360 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
COL6A2-202ENST00000310645 F6X3S4 739 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 ADCY5O95622 1261 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
COL6A2-202ENST00000310645 LMOD3Q0VAK6 560 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 NME9Q86XW9 330 aa17.8■□□□□ 0.44
COL6A2-202ENST00000310645 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
COL6A2-202ENST00000310645 MCCP23508 829 aa17.79■□□□□ 0.44
COL6A2-202ENST00000310645 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
COL6A2-202ENST00000310645 IL13P35225 146 aa17.79■□□□□ 0.44
COL6A2-202ENST00000310645 MCM10Q7L590 875 aa17.79■□□□□ 0.44
COL6A2-202ENST00000310645 MIS18AQ9NYP9 233 aa17.79■□□□□ 0.44
COL6A2-202ENST00000310645 PHF14O94880 888 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 WAPLQ7Z5K2 1190 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
COL6A2-202ENST00000310645 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 HMMRO75330 724 aa17.78■□□□□ 0.44
COL6A2-202ENST00000310645 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
COL6A2-202ENST00000310645 ZNF710Q8N1W2 664 aa17.77■□□□□ 0.43
COL6A2-202ENST00000310645 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.43
COL6A2-202ENST00000310645 KNDC1Q76NI1 1749 aa17.77■□□□□ 0.43
COL6A2-202ENST00000310645 CD163L1Q9NR16 1453 aa17.77■□□□□ 0.43
COL6A2-202ENST00000310645 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 SPDYE4A6NLX3 237 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 MCM2P49736 904 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
COL6A2-202ENST00000310645 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
COL6A2-202ENST00000310645 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
COL6A2-202ENST00000310645 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
COL6A2-202ENST00000310645 SPC24Q8NBT2 197 aa17.75■□□□□ 0.43
COL6A2-202ENST00000310645 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
COL6A2-202ENST00000310645 HMGN5P82970 282 aaKnown RBP17.74■□□□□ 0.43
COL6A2-202ENST00000310645 CUL4AQ13619 759 aa17.74■□□□□ 0.43
COL6A2-202ENST00000310645 FIBPO43427 364 aa17.74■□□□□ 0.43
COL6A2-202ENST00000310645 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
COL6A2-202ENST00000310645 PRIMPOLQ96LW4 560 aa17.73■□□□□ 0.43
COL6A2-202ENST00000310645 G2E3Q7L622 706 aa17.73■□□□□ 0.43
COL6A2-202ENST00000310645 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
COL6A2-202ENST00000310645 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
COL6A2-202ENST00000310645 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
COL6A2-202ENST00000310645 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
COL6A2-202ENST00000310645 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
COL6A2-202ENST00000310645 IGSF3O75054 1194 aa17.72■□□□□ 0.43
COL6A2-202ENST00000310645 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
COL6A2-202ENST00000310645 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
COL6A2-202ENST00000310645 SOX12O15370 315 aa17.72■□□□□ 0.43
COL6A2-202ENST00000310645 ATP2B3Q16720 1220 aa17.72■□□□□ 0.43
COL6A2-202ENST00000310645 GIMAP6Q6P9H5 292 aa17.72■□□□□ 0.43
COL6A2-202ENST00000310645 FAM184AQ8NB25 1140 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms