RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 KCNA6P17658 529 aa24.82■■□□□ 1.56
LRFN4-201ENST00000309602 MTHFSDQ2M296 383 aaKnown RBP24.82■■□□□ 1.56
LRFN4-201ENST00000309602 RIMS1Q86UR5 1692 aaKnown RBP24.82■■□□□ 1.56
LRFN4-201ENST00000309602 ANTXR1Q9H6X2 564 aa24.82■■□□□ 1.56
LRFN4-201ENST00000309602 AMPHP49418 695 aa24.81■■□□□ 1.56
LRFN4-201ENST00000309602 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
LRFN4-201ENST00000309602 INTS3Q68E01 1043 aaKnown RBP24.81■■□□□ 1.56
LRFN4-201ENST00000309602 KDRP35968 1356 aa24.81■■□□□ 1.56
LRFN4-201ENST00000309602 BMP2KLQ5H9B9 411 aa24.8■■□□□ 1.56
LRFN4-201ENST00000309602 EYA1Q99502 592 aa24.8■■□□□ 1.56
LRFN4-201ENST00000309602 CEP170BQ9Y4F5 1589 aaPredicted RBP24.8■■□□□ 1.56
LRFN4-201ENST00000309602 ANKARQ7Z5J8 1434 aa24.79■■□□□ 1.56
LRFN4-201ENST00000309602 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
LRFN4-201ENST00000309602 MIS18AQ9NYP9 233 aa24.79■■□□□ 1.56
LRFN4-201ENST00000309602 GSE1Q14687 1217 aa24.78■■□□□ 1.56
LRFN4-201ENST00000309602 NLRP6P59044 892 aa24.78■■□□□ 1.56
LRFN4-201ENST00000309602 RTF1Q92541 710 aaKnown RBP24.76■■□□□ 1.55
LRFN4-201ENST00000309602 NUTM2GQ5VZR2 741 aa24.75■■□□□ 1.55
LRFN4-201ENST00000309602 PTPRCP08575 1304 aa24.75■■□□□ 1.55
LRFN4-201ENST00000309602 TSPYL4Q9UJ04 414 aa24.74■■□□□ 1.55
LRFN4-201ENST00000309602 MARF1Q9Y4F3 1742 aaKnown RBP24.74■■□□□ 1.55
LRFN4-201ENST00000309602 ATP10DQ9P241 1426 aa24.73■■□□□ 1.55
LRFN4-201ENST00000309602 MSH6P52701 1360 aa24.73■■□□□ 1.55
LRFN4-201ENST00000309602 GAS2L2Q8NHY3 880 aa24.73■■□□□ 1.55
LRFN4-201ENST00000309602 DCTPP1Q9H773 170 aa24.73■■□□□ 1.55
LRFN4-201ENST00000309602 SLC4A2P04920 1241 aa24.72■■□□□ 1.55
LRFN4-201ENST00000309602 RBM25P49756 843 aaKnown RBP24.72■■□□□ 1.55
LRFN4-201ENST00000309602 HOXC9P31274 260 aa24.72■■□□□ 1.55
LRFN4-201ENST00000309602 ANKRD44Q8N8A2 993 aa24.71■■□□□ 1.55
LRFN4-201ENST00000309602 SPRYD3Q8NCJ5 442 aa24.71■■□□□ 1.55
LRFN4-201ENST00000309602 CEP85Q6P2H3 762 aa24.69■■□□□ 1.54
LRFN4-201ENST00000309602 ABTB2Q8N961 1025 aa24.69■■□□□ 1.54
LRFN4-201ENST00000309602 MEIS3Q99687 375 aa24.69■■□□□ 1.54
LRFN4-201ENST00000309602 RTL1A6NKG5 1358 aa24.68■■□□□ 1.54
LRFN4-201ENST00000309602 NWD1Q149M9 1564 aa24.68■■□□□ 1.54
LRFN4-201ENST00000309602 TBC1D9Q6ZT07 1266 aa24.68■■□□□ 1.54
LRFN4-201ENST00000309602 G2E3Q7L622 706 aa24.68■■□□□ 1.54
LRFN4-201ENST00000309602 USP54Q70EL1 1684 aa24.68■■□□□ 1.54
LRFN4-201ENST00000309602 RPAP2Q8IXW5 612 aaPredicted RBP24.67■■□□□ 1.54
LRFN4-201ENST00000309602 PLEKHM2Q8IWE5 1019 aa24.67■■□□□ 1.54
LRFN4-201ENST00000309602 ADAMTSL3P82987 1691 aa24.66■■□□□ 1.54
LRFN4-201ENST00000309602 HTATSF1O43719 755 aaKnown RBP24.65■■□□□ 1.54
LRFN4-201ENST00000309602 GSPT1P15170 499 aaKnown RBP24.65■■□□□ 1.54
LRFN4-201ENST00000309602 LRRC37A3O60309 1634 aa24.65■■□□□ 1.54
LRFN4-201ENST00000309602 HSCBQ8IWL3 235 aa24.65■■□□□ 1.54
LRFN4-201ENST00000309602 LTV1Q96GA3 475 aaPredicted RBP24.64■■□□□ 1.54
LRFN4-201ENST00000309602 GNAT3A8MTJ3 354 aa24.64■■□□□ 1.53
LRFN4-201ENST00000309602 F6X3S4 739 aa24.63■■□□□ 1.53
LRFN4-201ENST00000309602 C16orf71Q8IYS4 520 aaPredicted RBP24.63■■□□□ 1.53
LRFN4-201ENST00000309602 PHF8Q9UPP1 1060 aa24.63■■□□□ 1.53
LRFN4-201ENST00000309602 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
LRFN4-201ENST00000309602 RBM33Q96EV2 1170 aaKnown RBP24.62■■□□□ 1.53
LRFN4-201ENST00000309602 CDC45O75419 566 aa24.62■■□□□ 1.53
LRFN4-201ENST00000309602 KIF2CQ99661 725 aa24.62■■□□□ 1.53
LRFN4-201ENST00000309602 SLC4A10Q6U841 1118 aa24.61■■□□□ 1.53
LRFN4-201ENST00000309602 SNX21Q969T3 373 aa24.61■■□□□ 1.53
LRFN4-201ENST00000309602 CHD2O14647 1828 aaKnown RBP24.61■■□□□ 1.53
LRFN4-201ENST00000309602 ANKLE2Q86XL3 938 aa24.61■■□□□ 1.53
LRFN4-201ENST00000309602 OTUD7AQ8TE49 926 aaPredicted RBP24.6■■□□□ 1.53
LRFN4-201ENST00000309602 MAP3K5Q99683 1374 aa24.6■■□□□ 1.53
LRFN4-201ENST00000309602 TTC22Q5TAA0 569 aa24.6■■□□□ 1.53
LRFN4-201ENST00000309602 IL17REQ8NFR9 667 aa24.6■■□□□ 1.53
LRFN4-201ENST00000309602 CHMP5Q9NZZ3 219 aa24.59■■□□□ 1.53
LRFN4-201ENST00000309602 CCT4P50991 539 aaKnown RBP24.59■■□□□ 1.53
LRFN4-201ENST00000309602 USHBP1Q8N6Y0 703 aa24.59■■□□□ 1.53
LRFN4-201ENST00000309602 STK31Q9BXU1 1019 aa24.59■■□□□ 1.53
LRFN4-201ENST00000309602 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
LRFN4-201ENST00000309602 NCOA3Q9Y6Q9 1424 aa24.58■■□□□ 1.52
LRFN4-201ENST00000309602 APBB1O00213 710 aa24.57■■□□□ 1.52
LRFN4-201ENST00000309602 FAM208AQ9UK61 1670 aaKnown RBP24.56■■□□□ 1.52
LRFN4-201ENST00000309602 CCDC30Q5VVM6 783 aa24.55■■□□□ 1.52
LRFN4-201ENST00000309602 LTN1O94822 1766 aa24.55■■□□□ 1.52
LRFN4-201ENST00000309602 FLIIQ13045 1269 aa24.55■■□□□ 1.52
LRFN4-201ENST00000309602 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
LRFN4-201ENST00000309602 TAF7Q15545 349 aaPredicted RBP24.54■■□□□ 1.52
LRFN4-201ENST00000309602 NFAT5O94916 1531 aa24.53■■□□□ 1.52
LRFN4-201ENST00000309602 IP6K1Q92551 441 aa24.53■■□□□ 1.52
LRFN4-201ENST00000309602 HMMRO75330 724 aa24.53■■□□□ 1.52
LRFN4-201ENST00000309602 DDIT3P35638 169 aa24.53■■□□□ 1.52
LRFN4-201ENST00000309602 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
LRFN4-201ENST00000309602 FKBP5Q13451 457 aaPredicted RBP24.52■■□□□ 1.52
LRFN4-201ENST00000309602 ADGRL3Q9HAR2 1447 aa24.52■■□□□ 1.52
LRFN4-201ENST00000309602 CD2BP2O95400 341 aaKnown RBP24.52■■□□□ 1.52
LRFN4-201ENST00000309602 MCM4P33991 863 aa24.51■■□□□ 1.51
LRFN4-201ENST00000309602 ESCO1Q5FWF5 840 aa24.51■■□□□ 1.51
LRFN4-201ENST00000309602 IL27Q8NEV9 243 aa24.51■■□□□ 1.51
LRFN4-201ENST00000309602 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
LRFN4-201ENST00000309602 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
LRFN4-201ENST00000309602 GNAI2P04899 355 aa24.5■■□□□ 1.51
LRFN4-201ENST00000309602 HSP90AB1P08238 724 aaKnown RBP24.5■■□□□ 1.51
LRFN4-201ENST00000309602 SDSP20132 328 aa24.5■■□□□ 1.51
LRFN4-201ENST00000309602 PSME1Q06323 249 aa24.5■■□□□ 1.51
LRFN4-201ENST00000309602 NBPF6Q5VWK0 638 aa24.5■■□□□ 1.51
LRFN4-201ENST00000309602 NBPF4Q96M43 638 aa24.5■■□□□ 1.51
LRFN4-201ENST00000309602 SOS1Q07889 1333 aaPredicted RBP24.49■■□□□ 1.51
LRFN4-201ENST00000309602 BRPF3Q9ULD4 1205 aa24.48■■□□□ 1.51
LRFN4-201ENST00000309602 CEMIPQ8WUJ3 1361 aa24.46■■□□□ 1.51
LRFN4-201ENST00000309602 ZBTB7CA1YPR0 619 aa24.46■■□□□ 1.51
LRFN4-201ENST00000309602 SETD1BQ9UPS6 1966 aaKnown RBP24.46■■□□□ 1.51
LRFN4-201ENST00000309602 GNAI3P08754 354 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms