RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 HOXC9P31274 260 aa17.13■□□□□ 0.33
TPT1-201ENST00000309246 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
TPT1-201ENST00000309246 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
TPT1-201ENST00000309246 LY75O60449 1722 aa17.13■□□□□ 0.33
TPT1-201ENST00000309246 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
TPT1-201ENST00000309246 AMPHP49418 695 aa17.12■□□□□ 0.33
TPT1-201ENST00000309246 MEGF6O75095 1541 aa17.11■□□□□ 0.33
TPT1-201ENST00000309246 ZBTB22O15209 634 aa17.11■□□□□ 0.33
TPT1-201ENST00000309246 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
TPT1-201ENST00000309246 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
TPT1-201ENST00000309246 CHD4Q14839 1912 aa17.1■□□□□ 0.33
TPT1-201ENST00000309246 SGIP1Q9BQI5 828 aa17.1■□□□□ 0.33
TPT1-201ENST00000309246 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
TPT1-201ENST00000309246 USP47Q96K76 1375 aa17.1■□□□□ 0.33
TPT1-201ENST00000309246 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
TPT1-201ENST00000309246 RRS1Q15050 365 aaKnown RBP17.09■□□□□ 0.33
TPT1-201ENST00000309246 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
TPT1-201ENST00000309246 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
TPT1-201ENST00000309246 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
TPT1-201ENST00000309246 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
TPT1-201ENST00000309246 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
TPT1-201ENST00000309246 FYB1O15117 783 aa17.07■□□□□ 0.32
TPT1-201ENST00000309246 TMF1P82094 1093 aa17.07■□□□□ 0.32
TPT1-201ENST00000309246 NSD2O96028 1365 aa17.06■□□□□ 0.32
TPT1-201ENST00000309246 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
TPT1-201ENST00000309246 KCNQ4P56696 695 aa17.06■□□□□ 0.32
TPT1-201ENST00000309246 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
TPT1-201ENST00000309246 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
TPT1-201ENST00000309246 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
TPT1-201ENST00000309246 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
TPT1-201ENST00000309246 ARXQ96QS3 562 aa17.05■□□□□ 0.32
TPT1-201ENST00000309246 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
TPT1-201ENST00000309246 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
TPT1-201ENST00000309246 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
TPT1-201ENST00000309246 PNPLA7Q6ZV29 1317 aa17.03■□□□□ 0.32
TPT1-201ENST00000309246 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
TPT1-201ENST00000309246 ITGB4P16144 1822 aa17.03■□□□□ 0.32
TPT1-201ENST00000309246 C5P01031 1676 aa17.02■□□□□ 0.32
TPT1-201ENST00000309246 TAF1LQ8IZX4 1826 aa17.02■□□□□ 0.31
TPT1-201ENST00000309246 MAP3K5Q99683 1374 aa17.02■□□□□ 0.31
TPT1-201ENST00000309246 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
TPT1-201ENST00000309246 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
TPT1-201ENST00000309246 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
TPT1-201ENST00000309246 INSRP06213 1382 aa17.01■□□□□ 0.31
TPT1-201ENST00000309246 FLT4P35916 1363 aa17.01■□□□□ 0.31
TPT1-201ENST00000309246 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
TPT1-201ENST00000309246 HSP90AB2PQ58FF8 381 aa17■□□□□ 0.31
TPT1-201ENST00000309246 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
TPT1-201ENST00000309246 PKD1L3Q7Z443 1732 aa17■□□□□ 0.31
TPT1-201ENST00000309246 RAPGEF4Q8WZA2 1011 aa17■□□□□ 0.31
TPT1-201ENST00000309246 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
TPT1-201ENST00000309246 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
TPT1-201ENST00000309246 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
TPT1-201ENST00000309246 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
TPT1-201ENST00000309246 CDCA8Q53HL2 280 aa16.99■□□□□ 0.31
TPT1-201ENST00000309246 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
TPT1-201ENST00000309246 SLC16A10Q8TF71 515 aa16.99■□□□□ 0.31
TPT1-201ENST00000309246 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
TPT1-201ENST00000309246 POLD1P28340 1107 aa16.97■□□□□ 0.31
TPT1-201ENST00000309246 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
TPT1-201ENST00000309246 KIF24Q5T7B8 1368 aa16.97■□□□□ 0.31
TPT1-201ENST00000309246 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
TPT1-201ENST00000309246 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
TPT1-201ENST00000309246 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
TPT1-201ENST00000309246 EMILIN1Q9Y6C2 1016 aa16.96■□□□□ 0.31
TPT1-201ENST00000309246 CYP27B1O15528 508 aa16.93■□□□□ 0.3
TPT1-201ENST00000309246 GPR162Q16538 588 aa16.93■□□□□ 0.3
TPT1-201ENST00000309246 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
TPT1-201ENST00000309246 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
TPT1-201ENST00000309246 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
TPT1-201ENST00000309246 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
TPT1-201ENST00000309246 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
TPT1-201ENST00000309246 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
TPT1-201ENST00000309246 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
TPT1-201ENST00000309246 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
TPT1-201ENST00000309246 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
TPT1-201ENST00000309246 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
TPT1-201ENST00000309246 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
TPT1-201ENST00000309246 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
TPT1-201ENST00000309246 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
TPT1-201ENST00000309246 EYA1Q99502 592 aa16.86■□□□□ 0.29
TPT1-201ENST00000309246 PIGBQ92521 554 aa16.85■□□□□ 0.29
TPT1-201ENST00000309246 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
TPT1-201ENST00000309246 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
TPT1-201ENST00000309246 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
TPT1-201ENST00000309246 SPG7Q9UQ90 795 aa16.85■□□□□ 0.29
TPT1-201ENST00000309246 YBX3P16989 372 aaKnown RBP eCLIP16.84■□□□□ 0.298e-36■■□□□ 12.1
TPT1-201ENST00000309246 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
TPT1-201ENST00000309246 AK7Q96M32 723 aa16.84■□□□□ 0.29
TPT1-201ENST00000309246 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
TPT1-201ENST00000309246 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
TPT1-201ENST00000309246 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
TPT1-201ENST00000309246 FLAD1Q8NFF5 587 aa16.83■□□□□ 0.28
TPT1-201ENST00000309246 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
TPT1-201ENST00000309246 PHF14O94880 888 aa16.82■□□□□ 0.28
TPT1-201ENST00000309246 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
TPT1-201ENST00000309246 EIF4A2Q14240 407 aaKnown RBP16.81■□□□□ 0.28
TPT1-201ENST00000309246 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
TPT1-201ENST00000309246 LOC102724428A0A0B4J2F2 783 aa16.8■□□□□ 0.28
TPT1-201ENST00000309246 PHKG2P15735 406 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms