RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 ZCRB1Q8TBF4 217 aaKnown RBP29.7■■■□□ 2.34
SNUPN-201ENST00000308588 SOCS7O14512 581 aa29.67■■■□□ 2.34
SNUPN-201ENST00000308588 U2SURPO15042 1029 aaKnown RBP29.67■■■□□ 2.34
SNUPN-201ENST00000308588 HMOX1P09601 288 aa29.66■■■□□ 2.34
SNUPN-201ENST00000308588 FAM196AQ6ZSG2 479 aa29.66■■■□□ 2.34
SNUPN-201ENST00000308588 NUDCQ9Y266 331 aa29.66■■■□□ 2.34
SNUPN-201ENST00000308588 ANP32CO43423 234 aa29.65■■■□□ 2.34
SNUPN-201ENST00000308588 DDX54Q8TDD1 881 aaKnown RBP29.65■■■□□ 2.34
SNUPN-201ENST00000308588 UPF1Q92900 1129 aaKnown RBP eCLIP29.64■■■□□ 2.34
SNUPN-201ENST00000308588 SHANK3Q9BYB0 1731 aa29.64■■■□□ 2.34
SNUPN-201ENST00000308588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.63■■■□□ 2.33
SNUPN-201ENST00000308588 PLEKHG2Q9H7P9 1386 aa29.62■■■□□ 2.33
SNUPN-201ENST00000308588 PKD1L3Q7Z443 1732 aa29.61■■■□□ 2.33
SNUPN-201ENST00000308588 SPG7Q9UQ90 795 aa29.61■■■□□ 2.33
SNUPN-201ENST00000308588 BCL9O00512 1426 aa29.6■■■□□ 2.33
SNUPN-201ENST00000308588 PCDH11XQ9BZA7 1347 aa29.59■■■□□ 2.33
SNUPN-201ENST00000308588 PCDH11YQ9BZA8 1340 aa29.59■■■□□ 2.33
SNUPN-201ENST00000308588 CYP27B1O15528 508 aa29.59■■■□□ 2.33
SNUPN-201ENST00000308588 U2AF1L5P0DN76 240 aaPredicted RBP29.59■■■□□ 2.33
SNUPN-201ENST00000308588 U2AF1Q01081 240 aaKnown RBP eCLIP29.59■■■□□ 2.33
SNUPN-201ENST00000308588 PLEKHO1Q53GL0 409 aaPredicted RBP29.56■■■□□ 2.32
SNUPN-201ENST00000308588 AMOTQ4VCS5 1084 aa29.55■■■□□ 2.32
SNUPN-201ENST00000308588 RSPH6AQ9H0K4 717 aa29.55■■■□□ 2.32
SNUPN-201ENST00000308588 TRIM37O94972 964 aa29.54■■■□□ 2.32
SNUPN-201ENST00000308588 FCHSD2O94868 740 aa29.53■■■□□ 2.32
SNUPN-201ENST00000308588 CCDC125Q86Z20 511 aa29.53■■■□□ 2.32
SNUPN-201ENST00000308588 CCDC184Q52MB2 194 aa29.52■■■□□ 2.32
SNUPN-201ENST00000308588 SBF2Q86WG5 1849 aa29.52■■■□□ 2.32
SNUPN-201ENST00000308588 PHKG2P15735 406 aa29.51■■■□□ 2.32
SNUPN-201ENST00000308588 PRKAR2BP31323 418 aa29.51■■■□□ 2.32
SNUPN-201ENST00000308588 IFNL2Q8IZJ0 200 aa29.51■■■□□ 2.32
SNUPN-201ENST00000308588 NKX1-1Q15270 411 aaPredicted RBP29.5■■■□□ 2.31
SNUPN-201ENST00000308588 ZNF530Q6P9A1 599 aaPredicted RBP29.5■■■□□ 2.31
SNUPN-201ENST00000308588 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
SNUPN-201ENST00000308588 ACSBG1Q96GR2 724 aa29.5■■■□□ 2.31
SNUPN-201ENST00000308588 KCNQ2O43526 872 aa29.49■■■□□ 2.31
SNUPN-201ENST00000308588 MTHFSDQ2M296 383 aaKnown RBP29.48■■■□□ 2.31
SNUPN-201ENST00000308588 PHACTR3Q96KR7 559 aa29.47■■■□□ 2.31
SNUPN-201ENST00000308588 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
SNUPN-201ENST00000308588 SF3B2Q13435 895 aaKnown RBP29.45■■■□□ 2.3
SNUPN-201ENST00000308588 TNS1Q9HBL0 1735 aaKnown RBP29.45■■■□□ 2.3
SNUPN-201ENST00000308588 PLEKHF1Q96S99 279 aa29.44■■■□□ 2.3
SNUPN-201ENST00000308588 NHSQ6T4R5 1651 aa29.43■■■□□ 2.3
SNUPN-201ENST00000308588 KAT6BQ8WYB5 2073 aa29.43■■■□□ 2.3
SNUPN-201ENST00000308588 PRIM1P49642 420 aaKnown RBP29.43■■■□□ 2.3
SNUPN-201ENST00000308588 C1orf141Q5JVX7 400 aa29.43■■■□□ 2.3
SNUPN-201ENST00000308588 DIEXFQ68CQ4 756 aaKnown RBP29.43■■■□□ 2.3
SNUPN-201ENST00000308588 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.3
SNUPN-201ENST00000308588 DOT1LQ8TEK3 1739 aa29.42■■■□□ 2.3
SNUPN-201ENST00000308588 AKAP4Q5JQC9 854 aa29.41■■■□□ 2.3
SNUPN-201ENST00000308588 APBA3O96018 575 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 HSP90AB1P08238 724 aaKnown RBP29.4■■■□□ 2.3
SNUPN-201ENST00000308588 DEFB132Q7Z7B7 95 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 ADAMTS8Q9UP79 889 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 TOGARAM1Q9Y4F4 1720 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 GAS2L2Q8NHY3 880 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 SYTL4Q96C24 671 aaPredicted RBP29.4■■■□□ 2.3
SNUPN-201ENST00000308588 DCAF5Q96JK2 942 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 MRS2Q9HD23 443 aa29.4■■■□□ 2.3
SNUPN-201ENST00000308588 PNNQ9H307 717 aaKnown RBP29.39■■■□□ 2.3
SNUPN-201ENST00000308588 KDM6AO15550 1401 aaPredicted RBP29.38■■■□□ 2.29
SNUPN-201ENST00000308588 MPRIPQ6WCQ1 1025 aa29.38■■■□□ 2.29
SNUPN-201ENST00000308588 BAG6P46379 1132 aa29.37■■■□□ 2.29
SNUPN-201ENST00000308588 EN1Q05925 392 aaPredicted RBP29.35■■■□□ 2.29
SNUPN-201ENST00000308588 PNISRQ8TF01 805 aaKnown RBP29.35■■■□□ 2.29
SNUPN-201ENST00000308588 NEFMP07197 916 aa29.34■■■□□ 2.29
SNUPN-201ENST00000308588 BTAF1O14981 1849 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 ERVV-2B6SEH9 535 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 PLSCR1O15162 318 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 LGR6Q9HBX8 967 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 MAP3K5Q99683 1374 aa29.33■■■□□ 2.29
SNUPN-201ENST00000308588 ITGB4P16144 1822 aa29.32■■■□□ 2.28
SNUPN-201ENST00000308588 GNAT3A8MTJ3 354 aa29.32■■■□□ 2.28
SNUPN-201ENST00000308588 RNMTO43148 476 aaKnown RBP29.31■■■□□ 2.28
SNUPN-201ENST00000308588 CCDC146Q8IYE0 955 aa29.31■■■□□ 2.28
SNUPN-201ENST00000308588 PIGBQ92521 554 aa29.31■■■□□ 2.28
SNUPN-201ENST00000308588 MAPK8IP3Q9UPT6 1336 aa29.31■■■□□ 2.28
SNUPN-201ENST00000308588 EZH2Q15910 746 aaKnown RBP29.3■■■□□ 2.28
SNUPN-201ENST00000308588 TMOD3Q9NYL9 352 aa29.3■■■□□ 2.28
SNUPN-201ENST00000308588 SCN11AQ9UI33 1791 aa29.3■■■□□ 2.28
SNUPN-201ENST00000308588 ADAMTS7Q9UKP4 1686 aa29.29■■■□□ 2.28
SNUPN-201ENST00000308588 IL17REQ8NFR9 667 aa29.29■■■□□ 2.28
SNUPN-201ENST00000308588 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
SNUPN-201ENST00000308588 NFE2L2Q16236 605 aa29.28■■■□□ 2.28
SNUPN-201ENST00000308588 CABP4P57796 275 aa29.27■■■□□ 2.28
SNUPN-201ENST00000308588 PROM2Q8N271 834 aa29.25■■■□□ 2.27
SNUPN-201ENST00000308588 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
SNUPN-201ENST00000308588 RGPD3A6NKT7 1758 aaPredicted RBP29.24■■■□□ 2.27
SNUPN-201ENST00000308588 RGPD4Q7Z3J3 1758 aa29.24■■■□□ 2.27
SNUPN-201ENST00000308588 SLC52A2Q9HAB3 445 aa29.24■■■□□ 2.27
SNUPN-201ENST00000308588 VIRMAQ69YN4 1812 aaKnown RBP29.23■■■□□ 2.27
SNUPN-201ENST00000308588 CCER2I3L3R5 266 aa29.23■■■□□ 2.27
SNUPN-201ENST00000308588 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
SNUPN-201ENST00000308588 TMPOP42166 694 aaKnown RBP29.23■■■□□ 2.27
SNUPN-201ENST00000308588 MIER1Q8N108 512 aa29.23■■■□□ 2.27
SNUPN-201ENST00000308588 CEMIPQ8WUJ3 1361 aa29.23■■■□□ 2.27
SNUPN-201ENST00000308588 MRC1P22897 1456 aa29.23■■■□□ 2.27
SNUPN-201ENST00000308588 RTF1Q92541 710 aaKnown RBP29.22■■■□□ 2.27
SNUPN-201ENST00000308588 TXNRD1Q16881 649 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms