RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
KRT28-201ENST00000306658 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
KRT28-201ENST00000306658 ZNF853P0CG23 659 aa22.71■■□□□ 1.23
KRT28-201ENST00000306658 MCM10Q7L590 875 aa22.71■■□□□ 1.23
KRT28-201ENST00000306658 CERKQ8TCT0 537 aa22.71■■□□□ 1.23
KRT28-201ENST00000306658 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.22
KRT28-201ENST00000306658 COL16A1Q07092 1604 aaPredicted RBP22.7■■□□□ 1.22
KRT28-201ENST00000306658 MAP3K5Q99683 1374 aa22.69■■□□□ 1.22
KRT28-201ENST00000306658 RAPGEF4Q8WZA2 1011 aa22.69■■□□□ 1.22
KRT28-201ENST00000306658 EXOSC9Q06265 439 aaKnown RBP22.68■■□□□ 1.22
KRT28-201ENST00000306658 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
KRT28-201ENST00000306658 COL5A2P05997 1499 aaPredicted RBP22.66■■□□□ 1.22
KRT28-201ENST00000306658 MBIPQ9NS73 344 aa22.66■■□□□ 1.22
KRT28-201ENST00000306658 PLEKHG2Q9H7P9 1386 aa22.66■■□□□ 1.22
KRT28-201ENST00000306658 TATP17735 454 aaPredicted RBP22.65■■□□□ 1.22
KRT28-201ENST00000306658 EVA1CP58658 441 aa22.65■■□□□ 1.22
KRT28-201ENST00000306658 RARSP54136 660 aaKnown RBP22.65■■□□□ 1.22
KRT28-201ENST00000306658 AKAP4Q5JQC9 854 aa22.65■■□□□ 1.22
KRT28-201ENST00000306658 ZNF530Q6P9A1 599 aaPredicted RBP22.65■■□□□ 1.22
KRT28-201ENST00000306658 TOM1L2Q6ZVM7 507 aa22.65■■□□□ 1.22
KRT28-201ENST00000306658 CRB1P82279 1406 aa22.64■■□□□ 1.21
KRT28-201ENST00000306658 CHL1O00533 1208 aa22.64■■□□□ 1.21
KRT28-201ENST00000306658 C1orf141Q5JVX7 400 aa22.64■■□□□ 1.21
KRT28-201ENST00000306658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.64■■□□□ 1.21
KRT28-201ENST00000306658 BCAR3O75815 825 aa22.63■■□□□ 1.21
KRT28-201ENST00000306658 PLIN1O60240 522 aa22.62■■□□□ 1.21
KRT28-201ENST00000306658 ZNF428Q96B54 188 aa22.62■■□□□ 1.21
KRT28-201ENST00000306658 IL17REQ8NFR9 667 aa22.62■■□□□ 1.21
KRT28-201ENST00000306658 STRN4Q9NRL3 753 aa22.62■■□□□ 1.21
KRT28-201ENST00000306658 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
KRT28-201ENST00000306658 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
KRT28-201ENST00000306658 CARD10Q9BWT7 1032 aa22.61■■□□□ 1.21
KRT28-201ENST00000306658 BTG4Q9NY30 223 aa22.6■■□□□ 1.21
KRT28-201ENST00000306658 BABAM1Q9NWV8 329 aa22.58■■□□□ 1.21
KRT28-201ENST00000306658 CEMIPQ8WUJ3 1361 aa22.58■■□□□ 1.21
KRT28-201ENST00000306658 TAF7Q15545 349 aaPredicted RBP22.58■■□□□ 1.2
KRT28-201ENST00000306658 LARP1Q6PKG0 1096 aaKnown RBP22.58■■□□□ 1.2
KRT28-201ENST00000306658 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.2
KRT28-201ENST00000306658 LRRC37A3O60309 1634 aa22.58■■□□□ 1.2
KRT28-201ENST00000306658 MEGF6O75095 1541 aa22.57■■□□□ 1.2
KRT28-201ENST00000306658 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
KRT28-201ENST00000306658 CANXP27824 592 aaKnown RBP22.56■■□□□ 1.2
KRT28-201ENST00000306658 TWISTNBQ3B726 338 aaPredicted RBP22.56■■□□□ 1.2
KRT28-201ENST00000306658 ALDH1L2Q3SY69 923 aa22.56■■□□□ 1.2
KRT28-201ENST00000306658 VAMP4O75379 141 aa22.55■■□□□ 1.2
KRT28-201ENST00000306658 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
KRT28-201ENST00000306658 MPRIPQ6WCQ1 1025 aa22.55■■□□□ 1.2
KRT28-201ENST00000306658 LGR6Q9HBX8 967 aa22.55■■□□□ 1.2
KRT28-201ENST00000306658 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
KRT28-201ENST00000306658 JCADQ9P266 1359 aa22.54■■□□□ 1.2
KRT28-201ENST00000306658 OVOS2A0A0G2JMS6 1433 aa22.54■■□□□ 1.2
KRT28-201ENST00000306658 NUTM2BA6NNL0 878 aaPredicted RBP22.54■■□□□ 1.2
KRT28-201ENST00000306658 NUTM2EB1AL46 878 aaPredicted RBP22.54■■□□□ 1.2
KRT28-201ENST00000306658 NUTM2AQ8IVF1 878 aaPredicted RBP22.54■■□□□ 1.2
KRT28-201ENST00000306658 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
KRT28-201ENST00000306658 C8orf58Q8NAV2 365 aa22.54■■□□□ 1.2
KRT28-201ENST00000306658 BCL2L13Q9BXK5 485 aa22.54■■□□□ 1.2
KRT28-201ENST00000306658 RNMTO43148 476 aaKnown RBP22.53■■□□□ 1.2
KRT28-201ENST00000306658 IL2RBP14784 551 aa22.53■■□□□ 1.2
KRT28-201ENST00000306658 TEFQ10587 303 aa22.53■■□□□ 1.2
KRT28-201ENST00000306658 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
KRT28-201ENST00000306658 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
KRT28-201ENST00000306658 FRAT1Q92837 279 aaPredicted RBP22.53■■□□□ 1.2
KRT28-201ENST00000306658 MIS18AQ9NYP9 233 aa22.53■■□□□ 1.2
KRT28-201ENST00000306658 ELL2O00472 640 aaPredicted RBP22.52■■□□□ 1.2
KRT28-201ENST00000306658 PDE3AQ14432 1141 aa22.52■■□□□ 1.2
KRT28-201ENST00000306658 PARP4Q9UKK3 1724 aaKnown RBP22.52■■□□□ 1.2
KRT28-201ENST00000306658 PHKG2P15735 406 aa22.52■■□□□ 1.2
KRT28-201ENST00000306658 PKD1L3Q7Z443 1732 aa22.51■■□□□ 1.19
KRT28-201ENST00000306658 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
KRT28-201ENST00000306658 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
KRT28-201ENST00000306658 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
KRT28-201ENST00000306658 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
KRT28-201ENST00000306658 BRPF1P55201 1214 aaPredicted RBP22.49■■□□□ 1.19
KRT28-201ENST00000306658 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
KRT28-201ENST00000306658 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
KRT28-201ENST00000306658 PCDH11XQ9BZA7 1347 aa22.48■■□□□ 1.19
KRT28-201ENST00000306658 PCDH11YQ9BZA8 1340 aa22.48■■□□□ 1.19
KRT28-201ENST00000306658 IPO8O15397 1037 aaKnown RBP22.48■■□□□ 1.19
KRT28-201ENST00000306658 MS4A1P11836 297 aa22.48■■□□□ 1.19
KRT28-201ENST00000306658 CRBNQ96SW2 442 aa22.48■■□□□ 1.19
KRT28-201ENST00000306658 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
KRT28-201ENST00000306658 VIRMAQ69YN4 1812 aaKnown RBP22.47■■□□□ 1.19
KRT28-201ENST00000306658 CYP27B1O15528 508 aa22.47■■□□□ 1.19
KRT28-201ENST00000306658 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
KRT28-201ENST00000306658 PLCH1Q4KWH8 1693 aa22.47■■□□□ 1.19
KRT28-201ENST00000306658 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
KRT28-201ENST00000306658 ADAMTS7Q9UKP4 1686 aa22.46■■□□□ 1.19
KRT28-201ENST00000306658 BTBD11A6QL63 1104 aa22.46■■□□□ 1.19
KRT28-201ENST00000306658 SPATA31A6Q5VVP1 1343 aa22.46■■□□□ 1.19
KRT28-201ENST00000306658 KRT24Q2M2I5 525 aa22.46■■□□□ 1.19
KRT28-201ENST00000306658 NOB1Q9ULX3 412 aaKnown RBP22.44■■□□□ 1.18
KRT28-201ENST00000306658 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
KRT28-201ENST00000306658 MRPL50Q8N5N7 158 aaKnown RBP22.43■■□□□ 1.18
KRT28-201ENST00000306658 KDM6AO15550 1401 aaPredicted RBP22.43■■□□□ 1.18
KRT28-201ENST00000306658 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
KRT28-201ENST00000306658 SLC52A2Q9HAB3 445 aa22.42■■□□□ 1.18
KRT28-201ENST00000306658 NWD2Q9ULI1 1742 aa22.42■■□□□ 1.18
KRT28-201ENST00000306658 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
KRT28-201ENST00000306658 SLIT2O94813 1529 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms