RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 CCDC94Q9BW85 323 aaPredicted RBP18.11■□□□□ 0.49
DDB1-201ENST00000301764 FSD2A1L4K1 749 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDB1-201ENST00000301764 TRIM29Q14134 588 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 SKIDA1Q1XH10 827 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 PZPP20742 1482 aa18.11■□□□□ 0.49
DDB1-201ENST00000301764 UVSSAQ2YD98 709 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
DDB1-201ENST00000301764 KDM4AO75164 1064 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 STK38Q15208 465 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 STX6O43752 255 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
DDB1-201ENST00000301764 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
DDB1-201ENST00000301764 UBXN4Q92575 508 aa18.09■□□□□ 0.49
DDB1-201ENST00000301764 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
DDB1-201ENST00000301764 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
DDB1-201ENST00000301764 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
DDB1-201ENST00000301764 DDX11Q96FC9 970 aa18.09■□□□□ 0.49
DDB1-201ENST00000301764 LIMCH1Q9UPQ0 1083 aa18.09■□□□□ 0.49
DDB1-201ENST00000301764 PIK3C2GO75747 1445 aa18.09■□□□□ 0.49
DDB1-201ENST00000301764 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.49
DDB1-201ENST00000301764 PRPF40BQ6NWY9 871 aaKnown RBP18.08■□□□□ 0.49
DDB1-201ENST00000301764 OLFM4Q6UX06 510 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 UBE2HP62256 183 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 KIF18AQ8NI77 898 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 ANTXR1Q9H6X2 564 aa18.08■□□□□ 0.49
DDB1-201ENST00000301764 SERPINC1P01008 464 aa18.08■□□□□ 0.48
DDB1-201ENST00000301764 APPP05067 770 aa18.08■□□□□ 0.48
DDB1-201ENST00000301764 FBLN1P23142 703 aa18.08■□□□□ 0.48
DDB1-201ENST00000301764 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
DDB1-201ENST00000301764 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
DDB1-201ENST00000301764 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
DDB1-201ENST00000301764 CNPY2Q9Y2B0 182 aa18.07■□□□□ 0.48
DDB1-201ENST00000301764 EMILIN1Q9Y6C2 1016 aa18.07■□□□□ 0.48
DDB1-201ENST00000301764 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
DDB1-201ENST00000301764 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
DDB1-201ENST00000301764 ZNF396Q96N95 335 aaPredicted RBP18.07■□□□□ 0.48
DDB1-201ENST00000301764 LEKR1Q6ZMV7 388 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
DDB1-201ENST00000301764 IPO7O95373 1038 aaKnown RBP18.06■□□□□ 0.48
DDB1-201ENST00000301764 TRDNQ13061 729 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 IL16Q14005 1332 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 SMAP1Q8IYB5 467 aaPredicted RBP18.06■□□□□ 0.48
DDB1-201ENST00000301764 SIL1Q9H173 461 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 ACBD3Q9H3P7 528 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
DDB1-201ENST00000301764 HIP1O00291 1037 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 CCDC70Q6NSX1 233 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 AK7Q96M32 723 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
DDB1-201ENST00000301764 CCDC186Q7Z3E2 898 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 RALYLQ86SE5 291 aaKnown RBP18.05■□□□□ 0.48
DDB1-201ENST00000301764 SCAND2PQ9GZW5 306 aaPredicted RBP18.05■□□□□ 0.48
DDB1-201ENST00000301764 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 CCP110O43303 1012 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 ZNF165P49910 485 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 ZNF445P59923 1031 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 TSC1Q92574 1164 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
DDB1-201ENST00000301764 C17orf53Q8N3J3 647 aaPredicted RBP18.04■□□□□ 0.48
DDB1-201ENST00000301764 MEIS3Q99687 375 aa18.04■□□□□ 0.48
DDB1-201ENST00000301764 POLR3GO15318 223 aaPredicted RBP18.04■□□□□ 0.48
DDB1-201ENST00000301764 TMCO3Q6UWJ1 677 aa18.04■□□□□ 0.48
DDB1-201ENST00000301764 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
DDB1-201ENST00000301764 BBXQ8WY36 941 aaPredicted RBP18.04■□□□□ 0.48
DDB1-201ENST00000301764 GJB2P29033 226 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 AKAP17AQ02040 695 aaKnown RBP18.03■□□□□ 0.48
DDB1-201ENST00000301764 AACSQ86V21 672 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 ATP2B1P20020 1258 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 WASHC4Q2M389 1173 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 ARHGAP45Q92619 1136 aa18.03■□□□□ 0.48
DDB1-201ENST00000301764 SFPQP23246 707 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDB1-201ENST00000301764 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
DDB1-201ENST00000301764 NLRP6P59044 892 aa18.02■□□□□ 0.48
DDB1-201ENST00000301764 LRRFIP1Q32MZ4 808 aaKnown RBP18.02■□□□□ 0.48
DDB1-201ENST00000301764 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
DDB1-201ENST00000301764 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.48
DDB1-201ENST00000301764 TSPYL6Q8N831 410 aa18.02■□□□□ 0.48
DDB1-201ENST00000301764 ANKRD20A12PQ8NF67 263 aa18.02■□□□□ 0.48
DDB1-201ENST00000301764 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDB1-201ENST00000301764 V9GYY5 206 aaPredicted RBP18.02■□□□□ 0.48
DDB1-201ENST00000301764 PDE1AP54750 535 aa18.02■□□□□ 0.47
DDB1-201ENST00000301764 CALCOCO1Q9P1Z2 691 aa18.02■□□□□ 0.47
DDB1-201ENST00000301764 GTF2F1P35269 517 aaKnown RBP eCLIP18.01■□□□□ 0.47
DDB1-201ENST00000301764 LMBRD1Q9NUN5 540 aa18.01■□□□□ 0.47
DDB1-201ENST00000301764 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
DDB1-201ENST00000301764 PCMTD1Q96MG8 357 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms