RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ZMYND15Q9H091 742 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
ABCA3-201ENST00000301732 MAP2K1Q02750 393 aaPredicted RBP14.54□□□□□ -0.08
ABCA3-201ENST00000301732 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
ABCA3-201ENST00000301732 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 CCDC144CPQ8IYA2 1237 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 UBA5Q9GZZ9 404 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
ABCA3-201ENST00000301732 SULT6B1Q6IMI4 303 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 ABTB2Q8N961 1025 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.53□□□□□ -0.08
ABCA3-201ENST00000301732 V9GYY5 206 aaPredicted RBP14.53□□□□□ -0.08
ABCA3-201ENST00000301732 ERLIN1O75477 346 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 WDR33Q9C0J8 1336 aaKnown RBP14.53□□□□□ -0.08
ABCA3-201ENST00000301732 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
ABCA3-201ENST00000301732 CTNNBL1Q8WYA6 563 aaPredicted RBP14.52□□□□□ -0.08
ABCA3-201ENST00000301732 CCP110O43303 1012 aa14.52□□□□□ -0.08
ABCA3-201ENST00000301732 PTPN14Q15678 1187 aa14.52□□□□□ -0.08
ABCA3-201ENST00000301732 CFAP70Q5T0N1 1121 aa14.52□□□□□ -0.08
ABCA3-201ENST00000301732 TFIP11Q9UBB9 837 aaKnown RBP14.52□□□□□ -0.08
ABCA3-201ENST00000301732 HDGFL1Q5TGJ6 251 aa14.52□□□□□ -0.09
ABCA3-201ENST00000301732 GOLGA6L7A0A1B0GV03 622 aa14.52□□□□□ -0.09
ABCA3-201ENST00000301732 SRGAP3O43295 1099 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 CASQ1P31415 396 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 PDCP20941 246 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 BLOC1S2Q6QNY1 142 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
ABCA3-201ENST00000301732 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 CRACR2AQ9BSW2 395 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 CNTLNQ9NXG0 1405 aa14.51□□□□□ -0.09
ABCA3-201ENST00000301732 ZRSR2Q15696 482 aaKnown RBP14.51□□□□□ -0.09
ABCA3-201ENST00000301732 IDH1O75874 414 aaKnown RBP14.5□□□□□ -0.09
ABCA3-201ENST00000301732 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
ABCA3-201ENST00000301732 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
ABCA3-201ENST00000301732 KIF4BQ2VIQ3 1234 aa14.5□□□□□ -0.09
ABCA3-201ENST00000301732 PRPF40BQ6NWY9 871 aaKnown RBP14.5□□□□□ -0.09
ABCA3-201ENST00000301732 TDO2P48775 406 aa14.5□□□□□ -0.09
ABCA3-201ENST00000301732 ZSCAN30Q86W11 494 aa14.5□□□□□ -0.09
ABCA3-201ENST00000301732 LMAN1P49257 510 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 CLIP2Q9UDT6 1046 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 GBP2P32456 591 aaPredicted RBP14.49□□□□□ -0.09
ABCA3-201ENST00000301732 MPHOSPH10O00566 681 aaKnown RBP14.49□□□□□ -0.09
ABCA3-201ENST00000301732 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.49□□□□□ -0.09
ABCA3-201ENST00000301732 TMEM57Q8N5G2 664 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 GNAI3P08754 354 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 KIF6Q6ZMV9 814 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 TRIM22Q8IYM9 498 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 CEP57L1Q8IYX8 460 aa14.49□□□□□ -0.09
ABCA3-201ENST00000301732 STIM1Q13586 685 aa14.48□□□□□ -0.09
ABCA3-201ENST00000301732 DRC1Q96MC2 740 aa14.48□□□□□ -0.09
ABCA3-201ENST00000301732 CCDC96Q2M329 555 aa14.48□□□□□ -0.09
ABCA3-201ENST00000301732 ABCF2Q9UG63 623 aa14.48□□□□□ -0.09
ABCA3-201ENST00000301732 NUTM2BA6NNL0 878 aaPredicted RBP14.47□□□□□ -0.09
ABCA3-201ENST00000301732 NUTM2EB1AL46 878 aaPredicted RBP14.47□□□□□ -0.09
ABCA3-201ENST00000301732 NUTM2AQ8IVF1 878 aaPredicted RBP14.47□□□□□ -0.09
ABCA3-201ENST00000301732 BOLA2Q9H3K6 86 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 MINDY4BA8MYZ0 360 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
ABCA3-201ENST00000301732 MMRN2Q9H8L6 949 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 TMCO5BA8MYB1 307 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 IFFO1Q0D2I5 559 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 TXNDC2Q86VQ3 553 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 TAF4BQ92750 862 aa14.47□□□□□ -0.09
ABCA3-201ENST00000301732 NEBLO76041 1014 aa14.46□□□□□ -0.09
ABCA3-201ENST00000301732 ZNF76P36508 570 aa14.46□□□□□ -0.09
ABCA3-201ENST00000301732 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
ABCA3-201ENST00000301732 PPM1FP49593 454 aaPredicted RBP14.46□□□□□ -0.09
ABCA3-201ENST00000301732 PRPF4BQ13523 1007 aaKnown RBP14.46□□□□□ -0.09
ABCA3-201ENST00000301732 SOGA3Q5TF21 947 aa14.46□□□□□ -0.09
ABCA3-201ENST00000301732 SHTN1A0MZ66 631 aa14.46□□□□□ -0.1
ABCA3-201ENST00000301732 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.1
ABCA3-201ENST00000301732 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 MVPQ14764 893 aaKnown RBP14.45□□□□□ -0.1
ABCA3-201ENST00000301732 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 TMC6Q7Z403 805 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 GCC1Q96CN9 775 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 F6X3S4 739 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 CCDC148Q8NFR7 591 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 SFPQP23246 707 aaKnown RBP eCLIP14.45□□□□□ -0.1
ABCA3-201ENST00000301732 HLTFQ14527 1009 aaKnown RBP eCLIP14.45□□□□□ -0.1
ABCA3-201ENST00000301732 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
ABCA3-201ENST00000301732 NUP88Q99567 741 aaPredicted RBP14.45□□□□□ -0.1
ABCA3-201ENST00000301732 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
ABCA3-201ENST00000301732 SPG7Q9UQ90 795 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 MCM2P49736 904 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 CCDC8Q9H0W5 538 aaPredicted RBP14.44□□□□□ -0.1
ABCA3-201ENST00000301732 MCM10Q7L590 875 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 LUZP1Q86V48 1076 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 PRAM1Q96QH2 718 aa14.44□□□□□ -0.1
ABCA3-201ENST00000301732 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms