RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 LRRFIP2Q9Y608 721 aaKnown RBP21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 FGD1P98174 961 aa21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 ZSCAN23Q3MJ62 389 aa21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 HDGFL1Q5TGJ6 251 aa21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 ACEP12821 1306 aa21.12■□□□□ 0.97
CHRNA5-201ENST00000299565 TET3O43151 1660 aa21.11■□□□□ 0.97
CHRNA5-201ENST00000299565 AIMP1Q12904 312 aaKnown RBP21.11■□□□□ 0.97
CHRNA5-201ENST00000299565 KLHL40Q2TBA0 621 aa21.11■□□□□ 0.97
CHRNA5-201ENST00000299565 KIF1BO60333 1816 aa21.11■□□□□ 0.97
CHRNA5-201ENST00000299565 GOLGA6L4A6NEF3 574 aa21.11■□□□□ 0.97
CHRNA5-201ENST00000299565 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
CHRNA5-201ENST00000299565 MX1P20591 662 aa21.1■□□□□ 0.97
CHRNA5-201ENST00000299565 PDE1AP54750 535 aa21.1■□□□□ 0.97
CHRNA5-201ENST00000299565 CWC27Q6UX04 472 aaKnown RBP21.1■□□□□ 0.97
CHRNA5-201ENST00000299565 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
CHRNA5-201ENST00000299565 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 EID1Q9Y6B2 187 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 SYAP1Q96A49 352 aaPredicted RBP21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 TMX3Q96JJ7 454 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 MSH6P52701 1360 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 ZSCAN30Q86W11 494 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 DIAPH3Q9NSV4 1193 aa21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 C9orf78Q9NZ63 289 aaPredicted RBP21.09■□□□□ 0.97
CHRNA5-201ENST00000299565 SRGAP3O43295 1099 aa21.08■□□□□ 0.97
CHRNA5-201ENST00000299565 GNAI3P08754 354 aa21.08■□□□□ 0.97
CHRNA5-201ENST00000299565 TEFQ10587 303 aa21.08■□□□□ 0.97
CHRNA5-201ENST00000299565 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.97
CHRNA5-201ENST00000299565 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.96
CHRNA5-201ENST00000299565 KIF2CQ99661 725 aa21.08■□□□□ 0.96
CHRNA5-201ENST00000299565 YEATS2Q9ULM3 1422 aa21.08■□□□□ 0.96
CHRNA5-201ENST00000299565 ERBB4Q15303 1308 aa21.08■□□□□ 0.96
CHRNA5-201ENST00000299565 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
CHRNA5-201ENST00000299565 FLIIQ13045 1269 aa21.07■□□□□ 0.96
CHRNA5-201ENST00000299565 DRC7Q8IY82 874 aa21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 RNF17Q9BXT8 1623 aaKnown RBP21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 KIAA2012Q0VF49 1180 aa21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 CWC22Q9HCG8 908 aaKnown RBP21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 POGZQ7Z3K3 1410 aa21.06■□□□□ 0.96
CHRNA5-201ENST00000299565 FOSBP53539 338 aa21.05■□□□□ 0.96
CHRNA5-201ENST00000299565 RBSNQ9H1K0 784 aa21.05■□□□□ 0.96
CHRNA5-201ENST00000299565 ABCC4O15439 1325 aa21.04■□□□□ 0.96
CHRNA5-201ENST00000299565 SMC3Q9UQE7 1217 aa21.04■□□□□ 0.96
CHRNA5-201ENST00000299565 SIL1Q9H173 461 aa21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 TTC21BQ7Z4L5 1316 aa21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 ZNF830Q96NB3 372 aaPredicted RBP21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 CPA1P15085 419 aa21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 RIMS2Q9UQ26 1411 aa21.03■□□□□ 0.96
CHRNA5-201ENST00000299565 NLRP1Q9C000 1473 aa21.02■□□□□ 0.96
CHRNA5-201ENST00000299565 FERMT3Q86UX7 667 aa21.02■□□□□ 0.96
CHRNA5-201ENST00000299565 CEP152O94986 1710 aa21.02■□□□□ 0.96
CHRNA5-201ENST00000299565 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.01■□□□□ 0.95
CHRNA5-201ENST00000299565 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
CHRNA5-201ENST00000299565 SHROOM2Q13796 1616 aa21.01■□□□□ 0.95
CHRNA5-201ENST00000299565 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
CHRNA5-201ENST00000299565 IFIT2P09913 472 aaKnown RBP21.01■□□□□ 0.95
CHRNA5-201ENST00000299565 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
CHRNA5-201ENST00000299565 TAF7Q15545 349 aaPredicted RBP21■□□□□ 0.95
CHRNA5-201ENST00000299565 IQSEC2Q5JU85 1478 aa21■□□□□ 0.95
CHRNA5-201ENST00000299565 SPC24Q8NBT2 197 aa20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 TSPY26PQ9H489 355 aa20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 ZNF330Q9Y3S2 320 aaPredicted RBP20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 CHL1O00533 1208 aa20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 SRCIN1Q9C0H9 1055 aa20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
CHRNA5-201ENST00000299565 TCEANC2Q96MN5 208 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 MYOM1P52179 1685 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 STK3Q13188 491 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 ESYT1Q9BSJ8 1104 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 MBD3O95983 291 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 USP25Q9UHP3 1055 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 QRICH2Q9H0J4 1663 aa20.98■□□□□ 0.95
CHRNA5-201ENST00000299565 GNAT3A8MTJ3 354 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 FBXW7Q969H0 707 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 PTPRCP08575 1304 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 MAP3K19Q56UN5 1328 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 EYA1Q99502 592 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 TMEM63CQ9P1W3 806 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 NSFL1CQ9UNZ2 370 aaKnown RBP20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 CCDC83Q8IWF9 413 aa20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 PPRC1Q5VV67 1664 aaKnown RBP20.97■□□□□ 0.95
CHRNA5-201ENST00000299565 PHF14O94880 888 aa20.96■□□□□ 0.95
CHRNA5-201ENST00000299565 ZNF853P0CG23 659 aa20.96■□□□□ 0.95
CHRNA5-201ENST00000299565 CASTP20810 708 aaKnown RBP20.96■□□□□ 0.95
CHRNA5-201ENST00000299565 HSP90B1P14625 803 aaKnown RBP20.96■□□□□ 0.95
CHRNA5-201ENST00000299565 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
CHRNA5-201ENST00000299565 CLASRPQ8N2M8 674 aaKnown RBP20.95■□□□□ 0.94
CHRNA5-201ENST00000299565 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
CHRNA5-201ENST00000299565 UQCRHLA0A096LP55 91 aa20.95■□□□□ 0.94
CHRNA5-201ENST00000299565 A0A0G2JS52 829 aa20.95■□□□□ 0.94
CHRNA5-201ENST00000299565 PPFIA3O75145 1194 aa20.95■□□□□ 0.94
CHRNA5-201ENST00000299565 UQCRHP07919 91 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms