RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 LEKR1Q6ZMV7 388 aa19.49■□□□□ 0.71
ARHGEF40-201ENST00000298694 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
ARHGEF40-201ENST00000298694 TXLNBQ8N3L3 684 aa19.49■□□□□ 0.71
ARHGEF40-201ENST00000298694 SLC52A1Q9NWF4 448 aa19.49■□□□□ 0.71
ARHGEF40-201ENST00000298694 IGHMBP2P38935 993 aaKnown RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 HMGN5P82970 282 aaKnown RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 ANKLE2Q86XL3 938 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 ANKRD62A6NC57 917 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 MPHOSPH10O00566 681 aaKnown RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 IDH1O75874 414 aaKnown RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 ZNF76P36508 570 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 BRPF3Q9ULD4 1205 aa19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 BMP2KQ9NSY1 1161 aaPredicted RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 SEPT7Q16181 437 aaKnown RBP19.48■□□□□ 0.71
ARHGEF40-201ENST00000298694 PIP4K2BP78356 416 aa19.47■□□□□ 0.71
ARHGEF40-201ENST00000298694 MATR3P43243 847 aaKnown RBP eCLIP19.47■□□□□ 0.71
ARHGEF40-201ENST00000298694 RBM10P98175 930 aaKnown RBP19.47■□□□□ 0.71
ARHGEF40-201ENST00000298694 CFAP45Q9UL16 551 aa19.47■□□□□ 0.71
ARHGEF40-201ENST00000298694 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 USP5P45974 858 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 KRT32Q14532 448 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 CEP57L1Q8IYX8 460 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 AIDAQ96BJ3 306 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
ARHGEF40-201ENST00000298694 ATAD2Q6PL18 1390 aa19.46■□□□□ 0.7
ARHGEF40-201ENST00000298694 ZC3H6P61129 1189 aaKnown RBP19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 ZRSR2Q15696 482 aaKnown RBP19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 CCDC112Q8NEF3 446 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 NUP62CLQ9H1M0 184 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 FCHSD2O94868 740 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 WASF1Q92558 559 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
ARHGEF40-201ENST00000298694 CASTP20810 708 aaKnown RBP19.44■□□□□ 0.7
ARHGEF40-201ENST00000298694 NFE2L2Q16236 605 aa19.44■□□□□ 0.7
ARHGEF40-201ENST00000298694 DDX11Q96FC9 970 aa19.44■□□□□ 0.7
ARHGEF40-201ENST00000298694 ENOX2Q16206 610 aaKnown RBP19.44■□□□□ 0.7
ARHGEF40-201ENST00000298694 GRPEL1Q9HAV7 217 aa19.44■□□□□ 0.7
ARHGEF40-201ENST00000298694 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 ABCF2Q9UG63 623 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 CCDC66A2RUB6 948 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 UPF3BQ9BZI7 483 aaKnown RBP19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 CENPHQ9H3R5 247 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 TMEM57Q8N5G2 664 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
ARHGEF40-201ENST00000298694 STARD3NLO95772 234 aa19.42■□□□□ 0.7
ARHGEF40-201ENST00000298694 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
ARHGEF40-201ENST00000298694 RPGRIP1LQ68CZ1 1315 aa19.42■□□□□ 0.7
ARHGEF40-201ENST00000298694 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
ARHGEF40-201ENST00000298694 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
ARHGEF40-201ENST00000298694 ERLIN1O75477 346 aa19.41■□□□□ 0.7
ARHGEF40-201ENST00000298694 FAM193AP78312 1265 aa19.41■□□□□ 0.7
ARHGEF40-201ENST00000298694 TAX1BP1Q86VP1 789 aa19.41■□□□□ 0.7
ARHGEF40-201ENST00000298694 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
ARHGEF40-201ENST00000298694 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
ARHGEF40-201ENST00000298694 MCM10Q7L590 875 aa19.4■□□□□ 0.7
ARHGEF40-201ENST00000298694 EIF5P55010 431 aaKnown RBP19.4■□□□□ 0.7
ARHGEF40-201ENST00000298694 CEP131Q9UPN4 1083 aa19.4■□□□□ 0.7
ARHGEF40-201ENST00000298694 SMTNL1A8MU46 457 aa19.4■□□□□ 0.7
ARHGEF40-201ENST00000298694 DUSP27Q5VZP5 1158 aa19.39■□□□□ 0.7
ARHGEF40-201ENST00000298694 PLCD4Q9BRC7 762 aa19.39■□□□□ 0.69
ARHGEF40-201ENST00000298694 IBSPP21815 317 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF40-201ENST00000298694 FILIP1Q7Z7B0 1213 aa19.39■□□□□ 0.69
ARHGEF40-201ENST00000298694 TMOD2Q9NZR1 351 aa19.39■□□□□ 0.69
ARHGEF40-201ENST00000298694 IQCEQ6IPM2 695 aa19.38■□□□□ 0.69
ARHGEF40-201ENST00000298694 KIAA1328Q86T90 577 aa19.38■□□□□ 0.69
ARHGEF40-201ENST00000298694 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
ARHGEF40-201ENST00000298694 LRRFIP2Q9Y608 721 aaKnown RBP19.38■□□□□ 0.69
ARHGEF40-201ENST00000298694 SMARCA5O60264 1052 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 CAMK4Q16566 473 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 AKAP2Q9Y2D5 859 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 PTCD1O75127 700 aaKnown RBP19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 KIAA0754O94854 1291 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 MYD88Q99836 296 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 SSR1P43307 286 aaKnown RBP19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 KCNH5Q8NCM2 988 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 KIF1BPQ96EK5 621 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 SEC63Q9UGP8 760 aaKnown RBP19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 EIF3JO75822 258 aaKnown RBP19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 MX1P20591 662 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 CCDC83Q8IWF9 413 aa19.37■□□□□ 0.69
ARHGEF40-201ENST00000298694 EPB41L2O43491 1005 aaKnown RBP19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 NEBLO76041 1014 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 DESP17661 470 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 PRPF40BQ6NWY9 871 aaKnown RBP19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 POLR3DP05423 398 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 TMOD3Q9NYL9 352 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 MINDY4BA8MYZ0 360 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
ARHGEF40-201ENST00000298694 DAPK1P53355 1430 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms