RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 NALCNQ8IZF0 1738 aa16.69■□□□□ 0.26
PPP1CB-201ENST00000296122 RGPD8O14715 1765 aaPredicted RBP16.68■□□□□ 0.26
PPP1CB-201ENST00000296122 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
PPP1CB-201ENST00000296122 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
PPP1CB-201ENST00000296122 TRIM27P14373 513 aa16.67■□□□□ 0.26
PPP1CB-201ENST00000296122 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
PPP1CB-201ENST00000296122 VAMP4O75379 141 aa16.67■□□□□ 0.26
PPP1CB-201ENST00000296122 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
PPP1CB-201ENST00000296122 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
PPP1CB-201ENST00000296122 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
PPP1CB-201ENST00000296122 EVA1CP58658 441 aa16.66■□□□□ 0.26
PPP1CB-201ENST00000296122 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
PPP1CB-201ENST00000296122 TSPYL6Q8N831 410 aa16.65■□□□□ 0.26
PPP1CB-201ENST00000296122 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
PPP1CB-201ENST00000296122 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
PPP1CB-201ENST00000296122 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
PPP1CB-201ENST00000296122 CHL1O00533 1208 aa16.65■□□□□ 0.26
PPP1CB-201ENST00000296122 MST1RQ04912 1400 aa16.64■□□□□ 0.25
PPP1CB-201ENST00000296122 NWD1Q149M9 1564 aa16.64■□□□□ 0.25
PPP1CB-201ENST00000296122 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
PPP1CB-201ENST00000296122 ZNF853P0CG23 659 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 RLBP1P12271 317 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 KDRP35968 1356 aa16.63■□□□□ 0.25
PPP1CB-201ENST00000296122 SLC4A10Q6U841 1118 aa16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 SLC4A2P04920 1241 aa16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 NPM2Q86SE8 214 aaKnown RBP16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 NECTIN2Q92692 538 aa16.62■□□□□ 0.25
PPP1CB-201ENST00000296122 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
PPP1CB-201ENST00000296122 ARHGAP45Q92619 1136 aa16.61■□□□□ 0.25
PPP1CB-201ENST00000296122 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
PPP1CB-201ENST00000296122 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
PPP1CB-201ENST00000296122 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
PPP1CB-201ENST00000296122 USP19O94966 1318 aa16.6■□□□□ 0.25
PPP1CB-201ENST00000296122 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
PPP1CB-201ENST00000296122 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
PPP1CB-201ENST00000296122 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
PPP1CB-201ENST00000296122 DAXXQ9UER7 740 aaPredicted RBP16.59■□□□□ 0.25
PPP1CB-201ENST00000296122 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
PPP1CB-201ENST00000296122 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
PPP1CB-201ENST00000296122 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
PPP1CB-201ENST00000296122 BTBD11A6QL63 1104 aa16.58■□□□□ 0.25
PPP1CB-201ENST00000296122 KRT24Q2M2I5 525 aa16.58■□□□□ 0.25
PPP1CB-201ENST00000296122 HDGFL1Q5TGJ6 251 aa16.58■□□□□ 0.25
PPP1CB-201ENST00000296122 KIF1AQ12756 1690 aa16.57■□□□□ 0.24
PPP1CB-201ENST00000296122 ERBB3P21860 1342 aa16.57■□□□□ 0.24
PPP1CB-201ENST00000296122 BABAM1Q9NWV8 329 aa16.57■□□□□ 0.24
PPP1CB-201ENST00000296122 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
PPP1CB-201ENST00000296122 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
PPP1CB-201ENST00000296122 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
PPP1CB-201ENST00000296122 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
PPP1CB-201ENST00000296122 PTPRCP08575 1304 aa16.55■□□□□ 0.24
PPP1CB-201ENST00000296122 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
PPP1CB-201ENST00000296122 UPF2Q9HAU5 1272 aaKnown RBP16.55■□□□□ 0.24
PPP1CB-201ENST00000296122 PDE4AP27815 886 aa16.54■□□□□ 0.24
PPP1CB-201ENST00000296122 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
PPP1CB-201ENST00000296122 IFNL2Q8IZJ0 200 aa16.54■□□□□ 0.24
PPP1CB-201ENST00000296122 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
PPP1CB-201ENST00000296122 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
PPP1CB-201ENST00000296122 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
PPP1CB-201ENST00000296122 SOS1Q07889 1333 aaPredicted RBP16.53■□□□□ 0.24
PPP1CB-201ENST00000296122 IGHDP01880 384 aa16.53■□□□□ 0.24
PPP1CB-201ENST00000296122 RNMTO43148 476 aaKnown RBP16.52■□□□□ 0.23
PPP1CB-201ENST00000296122 LGR6Q9HBX8 967 aa16.52■□□□□ 0.23
PPP1CB-201ENST00000296122 HMMRO75330 724 aa16.52■□□□□ 0.23
PPP1CB-201ENST00000296122 KDM2BQ8NHM5 1336 aa16.52■□□□□ 0.23
PPP1CB-201ENST00000296122 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
PPP1CB-201ENST00000296122 A0A0G2JS52 829 aa16.51■□□□□ 0.23
PPP1CB-201ENST00000296122 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
PPP1CB-201ENST00000296122 C1orf115Q9H7X2 142 aa16.5■□□□□ 0.23
PPP1CB-201ENST00000296122 CABP4P57796 275 aa16.5■□□□□ 0.23
PPP1CB-201ENST00000296122 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
PPP1CB-201ENST00000296122 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 CRB1P82279 1406 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 NFAT5O94916 1531 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 FLIIQ13045 1269 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
PPP1CB-201ENST00000296122 TOM1O60784 492 aa16.48■□□□□ 0.23
PPP1CB-201ENST00000296122 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
PPP1CB-201ENST00000296122 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
PPP1CB-201ENST00000296122 CCDC9Q9Y3X0 531 aaKnown RBP16.47■□□□□ 0.23
PPP1CB-201ENST00000296122 DDX58O95786 925 aaKnown RBP16.47■□□□□ 0.23
PPP1CB-201ENST00000296122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.47■□□□□ 0.231e-8■□□□□ 10.9
PPP1CB-201ENST00000296122 GNAI3P08754 354 aa16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 HDAC1Q13547 482 aaPredicted RBP16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 F6X3S4 739 aa16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 SLIT3O75094 1523 aa16.46■□□□□ 0.23
PPP1CB-201ENST00000296122 HOXB7P09629 217 aa16.45■□□□□ 0.22
PPP1CB-201ENST00000296122 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms