RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KIF24Q5T7B8 1368 aa24.9■■□□□ 1.58
SCUBE1-201ENST00000290460 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
SCUBE1-201ENST00000290460 ARHGEF10O15013 1369 aa24.9■■□□□ 1.58
SCUBE1-201ENST00000290460 SLIT1O75093 1534 aa24.89■■□□□ 1.58
SCUBE1-201ENST00000290460 ATP10DQ9P241 1426 aa24.89■■□□□ 1.58
SCUBE1-201ENST00000290460 DCTPP1Q9H773 170 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 FLT4P35916 1363 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 ARHGAP23Q9P227 1491 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 PIK3C2AO00443 1686 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 GSPT1P15170 499 aaKnown RBP24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 KIF2CQ99661 725 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 CHMP5Q9NZZ3 219 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 TBX22Q9Y458 520 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 SBNO1A3KN83 1393 aa24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
SCUBE1-201ENST00000290460 SLC4A2P04920 1241 aa24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 AMPHP49418 695 aa24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 PLEKHM2Q8IWE5 1019 aa24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 C16orf71Q8IYS4 520 aaPredicted RBP24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 EYA1Q99502 592 aa24.87■■□□□ 1.57
SCUBE1-201ENST00000290460 MEIS3Q99687 375 aa24.86■■□□□ 1.57
SCUBE1-201ENST00000290460 NUTM2GQ5VZR2 741 aa24.86■■□□□ 1.57
SCUBE1-201ENST00000290460 ANKRD44Q8N8A2 993 aa24.86■■□□□ 1.57
SCUBE1-201ENST00000290460 RTF1Q92541 710 aaKnown RBP24.86■■□□□ 1.57
SCUBE1-201ENST00000290460 CEP85Q6P2H3 762 aa24.85■■□□□ 1.57
SCUBE1-201ENST00000290460 TSPYL4Q9UJ04 414 aa24.85■■□□□ 1.57
SCUBE1-201ENST00000290460 PTPRCP08575 1304 aa24.85■■□□□ 1.57
SCUBE1-201ENST00000290460 FER1L4A9Z1Z3 1794 aa24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 RTL1A6NKG5 1358 aa24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 APBB1O00213 710 aa24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 MCM4P33991 863 aa24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 OTUD7AQ8TE49 926 aaPredicted RBP24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 KDRP35968 1356 aa24.84■■□□□ 1.57
SCUBE1-201ENST00000290460 G2E3Q7L622 706 aa24.83■■□□□ 1.57
SCUBE1-201ENST00000290460 SNX21Q969T3 373 aa24.83■■□□□ 1.57
SCUBE1-201ENST00000290460 CD2BP2O95400 341 aaKnown RBP24.83■■□□□ 1.57
SCUBE1-201ENST00000290460 NCOA3Q9Y6Q9 1424 aa24.83■■□□□ 1.56
SCUBE1-201ENST00000290460 CDC45O75419 566 aa24.82■■□□□ 1.56
SCUBE1-201ENST00000290460 NLRP6P59044 892 aa24.82■■□□□ 1.56
SCUBE1-201ENST00000290460 IGSF1Q8N6C5 1336 aa24.82■■□□□ 1.56
SCUBE1-201ENST00000290460 F6X3S4 739 aa24.82■■□□□ 1.56
SCUBE1-201ENST00000290460 RBM42Q9BTD8 480 aaKnown RBP24.82■■□□□ 1.56
SCUBE1-201ENST00000290460 SMARCA5O60264 1052 aaPredicted RBP24.81■■□□□ 1.56
SCUBE1-201ENST00000290460 SLC4A10Q6U841 1118 aa24.81■■□□□ 1.56
SCUBE1-201ENST00000290460 RPAP2Q8IXW5 612 aaPredicted RBP24.81■■□□□ 1.56
SCUBE1-201ENST00000290460 THEMISQ8N1K5 641 aaPredicted RBP24.8■■□□□ 1.56
SCUBE1-201ENST00000290460 KCNA6P17658 529 aa24.79■■□□□ 1.56
SCUBE1-201ENST00000290460 TTC22Q5TAA0 569 aa24.79■■□□□ 1.56
SCUBE1-201ENST00000290460 XRN1Q8IZH2 1706 aaKnown RBP24.79■■□□□ 1.56
SCUBE1-201ENST00000290460 HSP90AB1P08238 724 aaKnown RBP24.79■■□□□ 1.56
SCUBE1-201ENST00000290460 DDIT3P35638 169 aa24.79■■□□□ 1.56
SCUBE1-201ENST00000290460 MARF1Q9Y4F3 1742 aaKnown RBP24.78■■□□□ 1.56
SCUBE1-201ENST00000290460 GAS2L2Q8NHY3 880 aa24.77■■□□□ 1.56
SCUBE1-201ENST00000290460 GZF1Q9H116 711 aaPredicted RBP24.76■■□□□ 1.55
SCUBE1-201ENST00000290460 FOXD4L1Q9NU39 408 aa24.76■■□□□ 1.55
SCUBE1-201ENST00000290460 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
SCUBE1-201ENST00000290460 HOXC9P31274 260 aa24.75■■□□□ 1.55
SCUBE1-201ENST00000290460 LTV1Q96GA3 475 aaPredicted RBP24.75■■□□□ 1.55
SCUBE1-201ENST00000290460 NECTIN2Q92692 538 aa24.74■■□□□ 1.55
SCUBE1-201ENST00000290460 ARXQ96QS3 562 aa24.74■■□□□ 1.55
SCUBE1-201ENST00000290460 ABTB2Q8N961 1025 aa24.73■■□□□ 1.55
SCUBE1-201ENST00000290460 SETD1BQ9UPS6 1966 aaKnown RBP24.72■■□□□ 1.55
SCUBE1-201ENST00000290460 LRRC37A3O60309 1634 aa24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 GNAT3A8MTJ3 354 aa24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 HSP90AA1P07900 732 aaKnown RBP24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 SDSP20132 328 aa24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
SCUBE1-201ENST00000290460 K7ELQ4 463 aaPredicted RBP24.7■■□□□ 1.55
SCUBE1-201ENST00000290460 TRAK2O60296 914 aa24.7■■□□□ 1.55
SCUBE1-201ENST00000290460 C14orf37Q86TY3 774 aa24.7■■□□□ 1.55
SCUBE1-201ENST00000290460 TNPO1Q92973 898 aaKnown RBP24.7■■□□□ 1.54
SCUBE1-201ENST00000290460 STK31Q9BXU1 1019 aa24.7■■□□□ 1.54
SCUBE1-201ENST00000290460 FAM208AQ9UK61 1670 aaKnown RBP24.7■■□□□ 1.54
SCUBE1-201ENST00000290460 CCT4P50991 539 aaKnown RBP24.69■■□□□ 1.54
SCUBE1-201ENST00000290460 USHBP1Q8N6Y0 703 aa24.69■■□□□ 1.54
SCUBE1-201ENST00000290460 RBM33Q96EV2 1170 aaKnown RBP24.69■■□□□ 1.54
SCUBE1-201ENST00000290460 IL17REQ8NFR9 667 aa24.68■■□□□ 1.54
SCUBE1-201ENST00000290460 FLIIQ13045 1269 aa24.68■■□□□ 1.54
SCUBE1-201ENST00000290460 AK9Q5TCS8 1911 aa24.67■■□□□ 1.54
SCUBE1-201ENST00000290460 HMMRO75330 724 aa24.67■■□□□ 1.54
SCUBE1-201ENST00000290460 FKBP5Q13451 457 aaPredicted RBP24.67■■□□□ 1.54
SCUBE1-201ENST00000290460 HTATSF1O43719 755 aaKnown RBP24.66■■□□□ 1.54
SCUBE1-201ENST00000290460 USP26Q9BXU7 913 aa24.66■■□□□ 1.54
SCUBE1-201ENST00000290460 EXOC6BQ9Y2D4 811 aa24.65■■□□□ 1.54
SCUBE1-201ENST00000290460 MAP3K5Q99683 1374 aa24.65■■□□□ 1.54
SCUBE1-201ENST00000290460 LTN1O94822 1766 aa24.65■■□□□ 1.54
SCUBE1-201ENST00000290460 RAB3GAP1Q15042 981 aa24.65■■□□□ 1.54
SCUBE1-201ENST00000290460 CIZ1Q9ULV3 898 aaPredicted RBP24.65■■□□□ 1.54
SCUBE1-201ENST00000290460 DDX11L8A8MPP1 907 aa24.64■■□□□ 1.54
SCUBE1-201ENST00000290460 GNAI2P04899 355 aa24.64■■□□□ 1.54
SCUBE1-201ENST00000290460 CCDC30Q5VVM6 783 aa24.64■■□□□ 1.54
SCUBE1-201ENST00000290460 CACNA1FO60840 1977 aa24.63■■□□□ 1.53
SCUBE1-201ENST00000290460 USP54Q70EL1 1684 aa24.63■■□□□ 1.53
SCUBE1-201ENST00000290460 L1TD1Q5T7N2 865 aaKnown RBP24.63■■□□□ 1.53
SCUBE1-201ENST00000290460 TSHZ3Q63HK5 1081 aa24.63■■□□□ 1.53
SCUBE1-201ENST00000290460 PNMA6EA0A0J9YXQ4 647 aa24.61■■□□□ 1.53
SCUBE1-201ENST00000290460 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
SCUBE1-201ENST00000290460 RABEP1Q15276 862 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms