RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
SHROOM4-201ENST00000289292 ZFYVE27Q5T4F4 411 aa18.1■□□□□ 0.49
SHROOM4-201ENST00000289292 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
SHROOM4-201ENST00000289292 CCDC43Q96MW1 224 aaKnown RBP18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 MX1P20591 662 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 CCDC183Q5T5S1 534 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 PANK2Q9BZ23 570 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 F6X3S4 739 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 TRIM27P14373 513 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
SHROOM4-201ENST00000289292 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.49
SHROOM4-201ENST00000289292 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.49
SHROOM4-201ENST00000289292 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.49
SHROOM4-201ENST00000289292 TBC1D9Q6ZT07 1266 aa18.08■□□□□ 0.49
SHROOM4-201ENST00000289292 CCDC69A6NI79 296 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 PIBF1Q8WXW3 757 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 GUCY1B3Q02153 619 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 FAM69CQ0P6D2 419 aa18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 RPAP2Q8IXW5 612 aaPredicted RBP18.08■□□□□ 0.48
SHROOM4-201ENST00000289292 CDK5RAP3Q96JB5 506 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 TRMT1Q9NXH9 659 aaKnown RBP18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 FCHSD2O94868 740 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 RTEL1-TNFRSF6BF6WH68 1400 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
SHROOM4-201ENST00000289292 KIF6Q6ZMV9 814 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 CFAP45Q9UL16 551 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 C16orf45Q96MC5 204 aaPredicted RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 CCDC85AQ96PX6 553 aaPredicted RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 EPRSP07814 1512 aaKnown RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 CBFA2T2O43439 604 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 TBC1D32Q96NH3 1257 aa18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 ZNF530Q6P9A1 599 aaPredicted RBP18.06■□□□□ 0.48
SHROOM4-201ENST00000289292 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 TXLNAP40222 546 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 PPP4R3BQ5MIZ7 849 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 CCDC181Q5TID7 509 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 ZSCAN23Q3MJ62 389 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 CFAP100Q494V2 611 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
SHROOM4-201ENST00000289292 ODF2Q5BJF6 829 aa18.04■□□□□ 0.48
SHROOM4-201ENST00000289292 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
SHROOM4-201ENST00000289292 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
SHROOM4-201ENST00000289292 ADCY5O95622 1261 aa18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 ZNHIT6Q9NWK9 470 aaKnown RBP18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 IKQ13123 557 aaPredicted RBP18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 DACH1Q9UI36 760 aa18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
SHROOM4-201ENST00000289292 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 ARHGEF11O15085 1522 aa18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 BOLA2Q9H3K6 86 aa18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 ABCC5O15440 1437 aa18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 POLR3GO15318 223 aaPredicted RBP18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 KIAA0754O94854 1291 aa18.02■□□□□ 0.48
SHROOM4-201ENST00000289292 TNNT1P13805 278 aa18.02■□□□□ 0.47
SHROOM4-201ENST00000289292 ZHX3Q9H4I2 956 aa18.02■□□□□ 0.47
SHROOM4-201ENST00000289292 MAPKBP1O60336 1514 aa18.02■□□□□ 0.47
SHROOM4-201ENST00000289292 KRT18P05783 430 aaKnown RBP18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 UBXN4Q92575 508 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 TRIM22Q8IYM9 498 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 ERLIN1O75477 346 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 C8orf34Q49A92 452 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
SHROOM4-201ENST00000289292 ATF3P18847 181 aa18■□□□□ 0.47
SHROOM4-201ENST00000289292 EIF3JO75822 258 aaKnown RBP18■□□□□ 0.47
SHROOM4-201ENST00000289292 POLA1P09884 1462 aaPredicted RBP18■□□□□ 0.47
SHROOM4-201ENST00000289292 CABP4P57796 275 aa18■□□□□ 0.47
SHROOM4-201ENST00000289292 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
SHROOM4-201ENST00000289292 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
SHROOM4-201ENST00000289292 IBSPP21815 317 aaPredicted RBP18■□□□□ 0.47
SHROOM4-201ENST00000289292 SMTNL1A8MU46 457 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 URI1O94763 535 aaPredicted RBP17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 GJB2P29033 226 aa17.99■□□□□ 0.47
SHROOM4-201ENST00000289292 CASQ1P31415 396 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms