RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 GNAI3P08754 354 aa19.38■□□□□ 0.69
SMAD6-201ENST00000288840 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
SMAD6-201ENST00000288840 FLIIQ13045 1269 aa19.38■□□□□ 0.69
SMAD6-201ENST00000288840 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
SMAD6-201ENST00000288840 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
SMAD6-201ENST00000288840 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
SMAD6-201ENST00000288840 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
SMAD6-201ENST00000288840 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
SMAD6-201ENST00000288840 DIAPH3Q9NSV4 1193 aa19.37■□□□□ 0.69
SMAD6-201ENST00000288840 GSPT1P15170 499 aaKnown RBP19.36■□□□□ 0.69
SMAD6-201ENST00000288840 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
SMAD6-201ENST00000288840 SIL1Q9H173 461 aa19.36■□□□□ 0.69
SMAD6-201ENST00000288840 DCTPP1Q9H773 170 aa19.36■□□□□ 0.69
SMAD6-201ENST00000288840 METP08581 1390 aa19.36■□□□□ 0.69
SMAD6-201ENST00000288840 PTMSP20962 102 aa19.35■□□□□ 0.69
SMAD6-201ENST00000288840 BAG4O95429 457 aaKnown RBP19.35■□□□□ 0.69
SMAD6-201ENST00000288840 MAP3K19Q56UN5 1328 aa19.35■□□□□ 0.69
SMAD6-201ENST00000288840 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
SMAD6-201ENST00000288840 CWC27Q6UX04 472 aaKnown RBP19.35■□□□□ 0.69
SMAD6-201ENST00000288840 SHROOM2Q13796 1616 aa19.34■□□□□ 0.69
SMAD6-201ENST00000288840 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
SMAD6-201ENST00000288840 EYA1Q99502 592 aa19.34■□□□□ 0.69
SMAD6-201ENST00000288840 MX1P20591 662 aa19.34■□□□□ 0.69
SMAD6-201ENST00000288840 CEP152O94986 1710 aa19.34■□□□□ 0.69
SMAD6-201ENST00000288840 GOLGA6L4A6NEF3 574 aa19.33■□□□□ 0.69
SMAD6-201ENST00000288840 VPS37CA5D8V6 355 aaPredicted RBP19.33■□□□□ 0.68
SMAD6-201ENST00000288840 ESPNB1AK53 854 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 CIZ1Q9ULV3 898 aaPredicted RBP19.33■□□□□ 0.68
SMAD6-201ENST00000288840 LAMC1P11047 1609 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 MSH6P52701 1360 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 IQGAP1P46940 1657 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.68
SMAD6-201ENST00000288840 RBM25P49756 843 aaKnown RBP19.33■□□□□ 0.68
SMAD6-201ENST00000288840 PKP1Q13835 747 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 GLIPR1L2Q4G1C9 344 aa19.33■□□□□ 0.68
SMAD6-201ENST00000288840 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
SMAD6-201ENST00000288840 ZNF530Q6P9A1 599 aaPredicted RBP19.32■□□□□ 0.68
SMAD6-201ENST00000288840 SRCIN1Q9C0H9 1055 aa19.32■□□□□ 0.68
SMAD6-201ENST00000288840 PPRC1Q5VV67 1664 aaKnown RBP19.32■□□□□ 0.68
SMAD6-201ENST00000288840 SYCE3A1L190 88 aa19.31■□□□□ 0.68
SMAD6-201ENST00000288840 FOSBP53539 338 aa19.31■□□□□ 0.68
SMAD6-201ENST00000288840 PDE1AP54750 535 aa19.31■□□□□ 0.68
SMAD6-201ENST00000288840 ABCC3O15438 1527 aa19.31■□□□□ 0.68
SMAD6-201ENST00000288840 PHAXQ9H814 394 aaKnown RBP19.3■□□□□ 0.68
SMAD6-201ENST00000288840 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
SMAD6-201ENST00000288840 LTKP29376 864 aa19.3■□□□□ 0.68
SMAD6-201ENST00000288840 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
SMAD6-201ENST00000288840 MLH3Q9UHC1 1453 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 FIBPO43427 364 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 MYL6BP14649 208 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 TULP4Q9NRJ4 1543 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 ZC3H6P61129 1189 aaKnown RBP19.29■□□□□ 0.68
SMAD6-201ENST00000288840 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
SMAD6-201ENST00000288840 NLRP2Q9NX02 1062 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 PRR36Q9H6K5 1346 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 A0A0U1RQG5 324 aaPredicted RBP19.29■□□□□ 0.68
SMAD6-201ENST00000288840 SNX21Q969T3 373 aa19.29■□□□□ 0.68
SMAD6-201ENST00000288840 CHL1O00533 1208 aa19.28■□□□□ 0.68
SMAD6-201ENST00000288840 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
SMAD6-201ENST00000288840 PKNOX2Q96KN3 472 aa19.28■□□□□ 0.68
SMAD6-201ENST00000288840 USP26Q9BXU7 913 aa19.28■□□□□ 0.68
SMAD6-201ENST00000288840 PNMA6EA0A0J9YXQ4 647 aa19.28■□□□□ 0.68
SMAD6-201ENST00000288840 PI4KAP2A4QPH2 592 aa19.27■□□□□ 0.68
SMAD6-201ENST00000288840 PI4KAP1Q8N8J0 262 aa19.27■□□□□ 0.68
SMAD6-201ENST00000288840 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
SMAD6-201ENST00000288840 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
SMAD6-201ENST00000288840 GAS2L3Q86XJ1 694 aa19.27■□□□□ 0.67
SMAD6-201ENST00000288840 CLASRPQ8N2M8 674 aaKnown RBP19.27■□□□□ 0.67
SMAD6-201ENST00000288840 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.67
SMAD6-201ENST00000288840 GLI2P10070 1586 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 BTBD11A6QL63 1104 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 SMC3Q9UQE7 1217 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 ABCC4O15439 1325 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 PTPRCP08575 1304 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 RIC3Q7Z5B4 369 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 GPATCH3Q96I76 525 aa19.26■□□□□ 0.67
SMAD6-201ENST00000288840 HSP90B1P14625 803 aaKnown RBP19.25■□□□□ 0.67
SMAD6-201ENST00000288840 THEMISQ8N1K5 641 aaPredicted RBP19.25■□□□□ 0.67
SMAD6-201ENST00000288840 SYAP1Q96A49 352 aaPredicted RBP19.25■□□□□ 0.67
SMAD6-201ENST00000288840 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
SMAD6-201ENST00000288840 TNRQ92752 1358 aa19.25■□□□□ 0.67
SMAD6-201ENST00000288840 HSP90AA2PQ14568 343 aaPredicted RBP19.25■□□□□ 0.67
SMAD6-201ENST00000288840 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
SMAD6-201ENST00000288840 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMAD6-201ENST00000288840 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
SMAD6-201ENST00000288840 R3HCC1Q9Y3T6 440 aaKnown RBP19.24■□□□□ 0.67
SMAD6-201ENST00000288840 PIP4K2AP48426 406 aaPredicted RBP19.24■□□□□ 0.67
SMAD6-201ENST00000288840 DRC7Q8IY82 874 aa19.24■□□□□ 0.67
SMAD6-201ENST00000288840 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
SMAD6-201ENST00000288840 CHPF2Q9P2E5 772 aa19.23■□□□□ 0.67
SMAD6-201ENST00000288840 CPA1P15085 419 aa19.23■□□□□ 0.67
SMAD6-201ENST00000288840 STK3Q13188 491 aa19.23■□□□□ 0.67
SMAD6-201ENST00000288840 CNTROBQ8N137 903 aa19.23■□□□□ 0.67
SMAD6-201ENST00000288840 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
SMAD6-201ENST00000288840 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
SMAD6-201ENST00000288840 FERMT3Q86UX7 667 aa19.22■□□□□ 0.67
SMAD6-201ENST00000288840 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
SMAD6-201ENST00000288840 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms