RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 METP08581 1390 aa16.37■□□□□ 0.21
SLC28A1-201ENST00000286749 NRKQ7Z2Y5 1582 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 APBB1O00213 710 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 TRIM44Q96DX7 344 aaPredicted RBP16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 MSH6P52701 1360 aa16.36■□□□□ 0.21
SLC28A1-201ENST00000286749 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
SLC28A1-201ENST00000286749 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
SLC28A1-201ENST00000286749 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
SLC28A1-201ENST00000286749 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
SLC28A1-201ENST00000286749 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 SDSP20132 328 aa16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 MCM10Q7L590 875 aa16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 TSPOAP1O95153 1857 aa16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 RTL1A6NKG5 1358 aa16.34■□□□□ 0.21
SLC28A1-201ENST00000286749 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.21
SLC28A1-201ENST00000286749 KLHL40Q2TBA0 621 aa16.33■□□□□ 0.21
SLC28A1-201ENST00000286749 CHL1O00533 1208 aa16.32■□□□□ 0.2
SLC28A1-201ENST00000286749 MEIS3Q99687 375 aa16.32■□□□□ 0.2
SLC28A1-201ENST00000286749 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
SLC28A1-201ENST00000286749 MLECQ14165 292 aa16.32■□□□□ 0.2
SLC28A1-201ENST00000286749 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
SLC28A1-201ENST00000286749 PRR36Q9H6K5 1346 aa16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 NUCB2P80303 420 aa16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 PKP1Q13835 747 aa16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 NASPP49321 788 aaPredicted RBP16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 CASC1Q6TDU7 716 aa16.31■□□□□ 0.2
SLC28A1-201ENST00000286749 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
SLC28A1-201ENST00000286749 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
SLC28A1-201ENST00000286749 PTPRCP08575 1304 aa16.3■□□□□ 0.2
SLC28A1-201ENST00000286749 AGLP35573 1532 aa16.3■□□□□ 0.2
SLC28A1-201ENST00000286749 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
SLC28A1-201ENST00000286749 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
SLC28A1-201ENST00000286749 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
SLC28A1-201ENST00000286749 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
SLC28A1-201ENST00000286749 PEAK1Q9H792 1746 aa16.28■□□□□ 0.2
SLC28A1-201ENST00000286749 ST18O60284 1047 aa16.28■□□□□ 0.2
SLC28A1-201ENST00000286749 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
SLC28A1-201ENST00000286749 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
SLC28A1-201ENST00000286749 CAVIN1Q6NZI2 390 aaKnown RBP16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.2
SLC28A1-201ENST00000286749 TECPR2O15040 1411 aa16.27■□□□□ 0.19
SLC28A1-201ENST00000286749 REC8O95072 547 aa16.27■□□□□ 0.19
SLC28A1-201ENST00000286749 TTC21BQ7Z4L5 1316 aa16.27■□□□□ 0.19
SLC28A1-201ENST00000286749 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
SLC28A1-201ENST00000286749 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
SLC28A1-201ENST00000286749 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
SLC28A1-201ENST00000286749 CRB1P82279 1406 aa16.26■□□□□ 0.19
SLC28A1-201ENST00000286749 ERC2O15083 957 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 ZNF445P59923 1031 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 SLC4A10Q6U841 1118 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 F6X3S4 739 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 HMMRO75330 724 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 G2E3Q7L622 706 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 NALCNQ8IZF0 1738 aa16.25■□□□□ 0.19
SLC28A1-201ENST00000286749 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 SOX12O15370 315 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 SIRT1Q96EB6 747 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 NUTM2FA1L443 756 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 ACEP12821 1306 aa16.24■□□□□ 0.19
SLC28A1-201ENST00000286749 PDE1AP54750 535 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 FOXO3O43524 673 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 ROBO2Q9HCK4 1378 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 TUBGCP6Q96RT7 1819 aa16.23■□□□□ 0.19
SLC28A1-201ENST00000286749 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.22■□□□□ 0.19
SLC28A1-201ENST00000286749 TSHZ3Q63HK5 1081 aa16.22■□□□□ 0.19
SLC28A1-201ENST00000286749 CHAMP1Q96JM3 812 aa16.22■□□□□ 0.19
SLC28A1-201ENST00000286749 GPT2Q8TD30 523 aa16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 OSBPL3Q9H4L5 887 aa16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 RBM27Q9P2N5 1060 aaKnown RBP16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 CCT4P50991 539 aaKnown RBP16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
SLC28A1-201ENST00000286749 MAP3K19Q56UN5 1328 aa16.2■□□□□ 0.18
SLC28A1-201ENST00000286749 RBSNQ9H1K0 784 aa16.2■□□□□ 0.18
SLC28A1-201ENST00000286749 NEK4P51957 841 aa16.2■□□□□ 0.18
SLC28A1-201ENST00000286749 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
SLC28A1-201ENST00000286749 USP6P35125 1406 aa16.2■□□□□ 0.18
SLC28A1-201ENST00000286749 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
SLC28A1-201ENST00000286749 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
SLC28A1-201ENST00000286749 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
SLC28A1-201ENST00000286749 GNAI2P04899 355 aa16.18■□□□□ 0.18
SLC28A1-201ENST00000286749 PRIM1P49642 420 aaKnown RBP16.18■□□□□ 0.18
SLC28A1-201ENST00000286749 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms