RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
USP43-201ENST00000285199 LETM1O95202 739 aaPredicted RBP18.72■□□□□ 0.59
USP43-201ENST00000285199 ME1P48163 572 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 DYNC1I1O14576 645 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 CCDC183Q5T5S1 534 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 NECAB1Q8N987 351 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 RASSF8Q8NHQ8 419 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
USP43-201ENST00000285199 USP19O94966 1318 aa18.71■□□□□ 0.59
USP43-201ENST00000285199 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.71■□□□□ 0.58
USP43-201ENST00000285199 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
USP43-201ENST00000285199 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 GOLGA6L1Q8N7Z2 621 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 ZRANB1Q9UGI0 708 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 CCT4P50991 539 aaKnown RBP18.7■□□□□ 0.58
USP43-201ENST00000285199 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 MAP3K11Q16584 847 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 FYB1O15117 783 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 TNNT1P13805 278 aa18.7■□□□□ 0.58
USP43-201ENST00000285199 CPA1P15085 419 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 PDE4CQ08493 712 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 ANXA1P04083 346 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 NEXNQ0ZGT2 675 aa18.69■□□□□ 0.58
USP43-201ENST00000285199 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
USP43-201ENST00000285199 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
USP43-201ENST00000285199 RIC3Q7Z5B4 369 aa18.68■□□□□ 0.58
USP43-201ENST00000285199 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
USP43-201ENST00000285199 AACSQ86V21 672 aa18.68■□□□□ 0.58
USP43-201ENST00000285199 SRCIN1Q9C0H9 1055 aa18.68■□□□□ 0.58
USP43-201ENST00000285199 PDCP20941 246 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 TEX35Q5T0J7 233 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 BLOC1S2Q6QNY1 142 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 TMX1Q9H3N1 280 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 RBM25P49756 843 aaKnown RBP18.67■□□□□ 0.58
USP43-201ENST00000285199 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
USP43-201ENST00000285199 STX6O43752 255 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 VAMP4O75379 141 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 TPM3P06753 285 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 WASHC4Q2M389 1173 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 HSP90AB4PQ58FF6 505 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 TMEM63CQ9P1W3 806 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 PSMA5P28066 241 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 FSD2A1L4K1 749 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
USP43-201ENST00000285199 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
USP43-201ENST00000285199 PDE1AP54750 535 aa18.65■□□□□ 0.58
USP43-201ENST00000285199 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
USP43-201ENST00000285199 CCDC186Q7Z3E2 898 aa18.65■□□□□ 0.58
USP43-201ENST00000285199 ZFP91Q96JP5 570 aaPredicted RBP18.65■□□□□ 0.58
USP43-201ENST00000285199 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
USP43-201ENST00000285199 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
USP43-201ENST00000285199 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
USP43-201ENST00000285199 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
USP43-201ENST00000285199 USP26Q9BXU7 913 aa18.65■□□□□ 0.58
USP43-201ENST00000285199 NUP153P49790 1475 aaKnown RBP18.64■□□□□ 0.58
USP43-201ENST00000285199 GJB2P29033 226 aa18.64■□□□□ 0.58
USP43-201ENST00000285199 DNM1Q05193 864 aaKnown RBP18.64■□□□□ 0.58
USP43-201ENST00000285199 POLR3GO15318 223 aaPredicted RBP18.64■□□□□ 0.57
USP43-201ENST00000285199 NOS1P29475 1434 aa18.64■□□□□ 0.57
USP43-201ENST00000285199 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
USP43-201ENST00000285199 FAM173BQ6P4H8 233 aa18.64■□□□□ 0.57
USP43-201ENST00000285199 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.57
USP43-201ENST00000285199 ISM2Q6H9L7 571 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
USP43-201ENST00000285199 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
USP43-201ENST00000285199 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 NOL7Q9UMY1 257 aaKnown RBP18.63■□□□□ 0.57
USP43-201ENST00000285199 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 ZMYM4Q5VZL5 1548 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
USP43-201ENST00000285199 STK38Q15208 465 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 LMBRD1Q9NUN5 540 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 IDI1Q13907 227 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
USP43-201ENST00000285199 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
USP43-201ENST00000285199 PTPN14Q15678 1187 aa18.62■□□□□ 0.57
USP43-201ENST00000285199 CCDC66A2RUB6 948 aa18.62■□□□□ 0.57
USP43-201ENST00000285199 BIN1O00499 593 aa18.62■□□□□ 0.57
USP43-201ENST00000285199 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
USP43-201ENST00000285199 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
USP43-201ENST00000285199 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
USP43-201ENST00000285199 CHMP4AQ9BY43 222 aa18.61■□□□□ 0.57
USP43-201ENST00000285199 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
USP43-201ENST00000285199 SERPINC1P01008 464 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 ZNF165P49910 485 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 MYL6BP14649 208 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 GPS2Q13227 327 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
USP43-201ENST00000285199 NFXL1Q6ZNB6 911 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 NAT10Q9H0A0 1025 aaKnown RBP18.6■□□□□ 0.57
USP43-201ENST00000285199 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
USP43-201ENST00000285199 MCM5P33992 734 aa18.6■□□□□ 0.57
USP43-201ENST00000285199 PTGS1P23219 599 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms