RNA–Protein interactions for RNA: ENST00000277010.8

SIGMAR1-201, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIGMAR1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-201ENST00000277010 U2AF1L5P0DN76 240 aaPredicted RBP30.52■■■□□ 2.48
SIGMAR1-201ENST00000277010 U2AF1Q01081 240 aaKnown RBP eCLIP30.52■■■□□ 2.48
SIGMAR1-201ENST00000277010 CCDC184Q52MB2 194 aa30.52■■■□□ 2.48
SIGMAR1-201ENST00000277010 TNS2Q63HR2 1409 aa30.52■■■□□ 2.48
SIGMAR1-201ENST00000277010 BRWD3Q6RI45 1802 aa30.51■■■□□ 2.48
SIGMAR1-201ENST00000277010 FAM182BQ5T319 152 aa30.51■■■□□ 2.47
SIGMAR1-201ENST00000277010 ZCRB1Q8TBF4 217 aaKnown RBP30.49■■■□□ 2.47
SIGMAR1-201ENST00000277010 EP400Q96L91 3159 aa30.49■■■□□ 2.47
SIGMAR1-201ENST00000277010 MARCH10Q8NA82 808 aaPredicted RBP30.46■■■□□ 2.47
SIGMAR1-201ENST00000277010 DDX54Q8TDD1 881 aaKnown RBP30.46■■■□□ 2.47
SIGMAR1-201ENST00000277010 RSPH6AQ9H0K4 717 aa30.44■■■□□ 2.46
SIGMAR1-201ENST00000277010 MRS2Q9HD23 443 aa30.43■■■□□ 2.46
SIGMAR1-201ENST00000277010 SPG7Q9UQ90 795 aa30.42■■■□□ 2.46
SIGMAR1-201ENST00000277010 PRKAR2BP31323 418 aa30.42■■■□□ 2.46
SIGMAR1-201ENST00000277010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.42■■■□□ 2.46
SIGMAR1-201ENST00000277010 WDR43Q15061 677 aaKnown RBP eCLIP30.41■■■□□ 2.46
SIGMAR1-201ENST00000277010 FCHSD2O94868 740 aa30.4■■■□□ 2.46
SIGMAR1-201ENST00000277010 PLEKHO1Q53GL0 409 aaPredicted RBP30.4■■■□□ 2.46
SIGMAR1-201ENST00000277010 PCDH11XQ9BZA7 1347 aa30.4■■■□□ 2.46
SIGMAR1-201ENST00000277010 PCDH11YQ9BZA8 1340 aa30.4■■■□□ 2.46
SIGMAR1-201ENST00000277010 CYP27B1O15528 508 aa30.39■■■□□ 2.46
SIGMAR1-201ENST00000277010 PLEKHG2Q9H7P9 1386 aa30.39■■■□□ 2.46
SIGMAR1-201ENST00000277010 PKD1L3Q7Z443 1732 aa30.39■■■□□ 2.46
SIGMAR1-201ENST00000277010 AMOTQ4VCS5 1084 aa30.39■■■□□ 2.45
SIGMAR1-201ENST00000277010 SHANK3Q9BYB0 1731 aa30.38■■■□□ 2.45
SIGMAR1-201ENST00000277010 FAM196AQ6ZSG2 479 aa30.36■■■□□ 2.45
SIGMAR1-201ENST00000277010 PHACTR3Q96KR7 559 aa30.36■■■□□ 2.45
SIGMAR1-201ENST00000277010 ADAMTS8Q9UP79 889 aa30.36■■■□□ 2.45
SIGMAR1-201ENST00000277010 ZNF530Q6P9A1 599 aaPredicted RBP30.35■■■□□ 2.45
SIGMAR1-201ENST00000277010 MIER1Q8N108 512 aa30.35■■■□□ 2.45
SIGMAR1-201ENST00000277010 MTHFSDQ2M296 383 aaKnown RBP30.34■■■□□ 2.45
SIGMAR1-201ENST00000277010 PHKG2P15735 406 aa30.33■■■□□ 2.45
SIGMAR1-201ENST00000277010 IFNL2Q8IZJ0 200 aa30.33■■■□□ 2.45
SIGMAR1-201ENST00000277010 PNISRQ8TF01 805 aaKnown RBP30.32■■■□□ 2.44
SIGMAR1-201ENST00000277010 PLEKHF1Q96S99 279 aa30.32■■■□□ 2.44
SIGMAR1-201ENST00000277010 C1orf141Q5JVX7 400 aa30.29■■■□□ 2.44
SIGMAR1-201ENST00000277010 ACSBG1Q96GR2 724 aa30.29■■■□□ 2.44
SIGMAR1-201ENST00000277010 PNNQ9H307 717 aaKnown RBP30.29■■■□□ 2.44
SIGMAR1-201ENST00000277010 BCL9O00512 1426 aa30.29■■■□□ 2.44
SIGMAR1-201ENST00000277010 CCDC146Q8IYE0 955 aa30.28■■■□□ 2.44
SIGMAR1-201ENST00000277010 NEFMP07197 916 aa30.27■■■□□ 2.44
SIGMAR1-201ENST00000277010 TRIM37O94972 964 aa30.27■■■□□ 2.44
SIGMAR1-201ENST00000277010 NKX1-1Q15270 411 aaPredicted RBP30.27■■■□□ 2.44
SIGMAR1-201ENST00000277010 GAS2L2Q8NHY3 880 aa30.27■■■□□ 2.44
SIGMAR1-201ENST00000277010 CCER2I3L3R5 266 aa30.26■■■□□ 2.43
SIGMAR1-201ENST00000277010 MAPK8IP3Q9UPT6 1336 aa30.25■■■□□ 2.43
SIGMAR1-201ENST00000277010 AKAP4Q5JQC9 854 aa30.25■■■□□ 2.43
SIGMAR1-201ENST00000277010 KCNQ2O43526 872 aa30.24■■■□□ 2.43
SIGMAR1-201ENST00000277010 PTF1AQ7RTS3 328 aa30.23■■■□□ 2.43
SIGMAR1-201ENST00000277010 UPF1Q92900 1129 aaKnown RBP eCLIP30.23■■■□□ 2.433e-8■■■■□ 24.7
SIGMAR1-201ENST00000277010 MPRIPQ6WCQ1 1025 aa30.23■■■□□ 2.43
SIGMAR1-201ENST00000277010 HSP90AB1P08238 724 aaKnown RBP30.22■■■□□ 2.43
SIGMAR1-201ENST00000277010 FAM9BQ8IZU0 186 aa30.22■■■□□ 2.43
SIGMAR1-201ENST00000277010 SYTL4Q96C24 671 aaPredicted RBP30.22■■■□□ 2.43
SIGMAR1-201ENST00000277010 PRIM1P49642 420 aaKnown RBP30.21■■■□□ 2.43
SIGMAR1-201ENST00000277010 RUNDC1Q96C34 613 aa30.21■■■□□ 2.43
SIGMAR1-201ENST00000277010 DCAF5Q96JK2 942 aa30.2■■■□□ 2.43
SIGMAR1-201ENST00000277010 KDM6AO15550 1401 aaPredicted RBP30.2■■■□□ 2.42
SIGMAR1-201ENST00000277010 MAP3K5Q99683 1374 aa30.19■■■□□ 2.42
SIGMAR1-201ENST00000277010 GNAT3A8MTJ3 354 aa30.18■■■□□ 2.42
SIGMAR1-201ENST00000277010 BCL11BQ9C0K0 894 aaPredicted RBP30.18■■■□□ 2.42
SIGMAR1-201ENST00000277010 DOT1LQ8TEK3 1739 aa30.18■■■□□ 2.42
SIGMAR1-201ENST00000277010 NFE2L2Q16236 605 aa30.17■■■□□ 2.42
SIGMAR1-201ENST00000277010 SBF2Q86WG5 1849 aa30.17■■■□□ 2.42
SIGMAR1-201ENST00000277010 LGR6Q9HBX8 967 aa30.17■■■□□ 2.42
SIGMAR1-201ENST00000277010 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
SIGMAR1-201ENST00000277010 NHSQ6T4R5 1651 aa30.15■■■□□ 2.42
SIGMAR1-201ENST00000277010 SF3B2Q13435 895 aaKnown RBP30.14■■■□□ 2.42
SIGMAR1-201ENST00000277010 CCDC125Q86Z20 511 aa30.14■■■□□ 2.42
SIGMAR1-201ENST00000277010 RRP7AQ9Y3A4 280 aaKnown RBP30.14■■■□□ 2.42
SIGMAR1-201ENST00000277010 SOCS7O14512 581 aa30.14■■■□□ 2.41
SIGMAR1-201ENST00000277010 RNMTO43148 476 aaKnown RBP30.14■■■□□ 2.41
SIGMAR1-201ENST00000277010 TMPOP42166 694 aaKnown RBP30.13■■■□□ 2.41
SIGMAR1-201ENST00000277010 APBA3O96018 575 aa30.12■■■□□ 2.41
SIGMAR1-201ENST00000277010 NEUROD2Q15784 382 aa30.12■■■□□ 2.41
SIGMAR1-201ENST00000277010 IL17REQ8NFR9 667 aa30.12■■■□□ 2.41
SIGMAR1-201ENST00000277010 ERVV-2B6SEH9 535 aa30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 APAF1O14727 1248 aa30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 RTF1Q92541 710 aaKnown RBP30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 RIPK4P57078 832 aa30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 DCTN1Q14203 1278 aa30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 TMOD3Q9NYL9 352 aa30.11■■■□□ 2.41
SIGMAR1-201ENST00000277010 KAT6BQ8WYB5 2073 aa30.1■■■□□ 2.41
SIGMAR1-201ENST00000277010 CABP4P57796 275 aa30.1■■■□□ 2.41
SIGMAR1-201ENST00000277010 MCM10Q7L590 875 aa30.1■■■□□ 2.41
SIGMAR1-201ENST00000277010 PIGBQ92521 554 aa30.1■■■□□ 2.41
SIGMAR1-201ENST00000277010 TNS1Q9HBL0 1735 aaKnown RBP30.09■■■□□ 2.41
SIGMAR1-201ENST00000277010 SENP3-EIF4A1A0A087X0R7 540 aa30.09■■■□□ 2.41
SIGMAR1-201ENST00000277010 DEFB132Q7Z7B7 95 aa30.08■■■□□ 2.41
SIGMAR1-201ENST00000277010 NFATC2IPQ8NCF5 419 aa30.07■■■□□ 2.41
SIGMAR1-201ENST00000277010 HTATSF1O43719 755 aaKnown RBP30.07■■■□□ 2.4
SIGMAR1-201ENST00000277010 SCN11AQ9UI33 1791 aa30.06■■■□□ 2.4
SIGMAR1-201ENST00000277010 ADAMTS7Q9UKP4 1686 aa30.06■■■□□ 2.4
SIGMAR1-201ENST00000277010 SLC52A2Q9HAB3 445 aa30.06■■■□□ 2.4
SIGMAR1-201ENST00000277010 CEMIPQ8WUJ3 1361 aa30.05■■■□□ 2.4
SIGMAR1-201ENST00000277010 BAG6P46379 1132 aa30.05■■■□□ 2.4
SIGMAR1-201ENST00000277010 EN1Q05925 392 aaPredicted RBP30.04■■■□□ 2.4
SIGMAR1-201ENST00000277010 BTAF1O14981 1849 aa30.04■■■□□ 2.4
SIGMAR1-201ENST00000277010 ITGB4P16144 1822 aa30.04■■■□□ 2.4
SIGMAR1-201ENST00000277010 THUMPD2Q9BTF0 503 aaKnown RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms