RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 YTHDC2Q9H6S0 1430 aaKnown RBP22.9■■□□□ 1.26
SSC4D-201ENST00000275560 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.25
SSC4D-201ENST00000275560 ZNF500O60304 480 aaPredicted RBP22.88■■□□□ 1.25
SSC4D-201ENST00000275560 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
SSC4D-201ENST00000275560 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
SSC4D-201ENST00000275560 ZKSCAN5Q9Y2L8 839 aa22.88■■□□□ 1.25
SSC4D-201ENST00000275560 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
SSC4D-201ENST00000275560 CEP85Q6P2H3 762 aa22.88■■□□□ 1.25
SSC4D-201ENST00000275560 IL13P35225 146 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 TPRNQ4KMQ1 711 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 LRSAM1Q6UWE0 723 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 WAPLQ7Z5K2 1190 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 ANKRD44Q8N8A2 993 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 MEIS3Q99687 375 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 RAPGEF3O95398 923 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 NME9Q86XW9 330 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 CWC22Q9HCG8 908 aaKnown RBP22.87■■□□□ 1.25
SSC4D-201ENST00000275560 ZFYVE9O95405 1425 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 ATP10DQ9P241 1426 aa22.87■■□□□ 1.25
SSC4D-201ENST00000275560 MYO5BQ9ULV0 1848 aa22.86■■□□□ 1.25
SSC4D-201ENST00000275560 NEK4P51957 841 aa22.86■■□□□ 1.25
SSC4D-201ENST00000275560 HS1BP3Q53T59 392 aa22.86■■□□□ 1.25
SSC4D-201ENST00000275560 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
SSC4D-201ENST00000275560 KIF20BQ96Q89 1820 aa22.85■■□□□ 1.25
SSC4D-201ENST00000275560 GDPD2Q9HCC8 539 aa22.85■■□□□ 1.25
SSC4D-201ENST00000275560 MSH6P52701 1360 aa22.85■■□□□ 1.25
SSC4D-201ENST00000275560 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
SSC4D-201ENST00000275560 DLG5Q8TDM6 1919 aa22.84■■□□□ 1.25
SSC4D-201ENST00000275560 PIK3C2BO00750 1634 aa22.83■■□□□ 1.25
SSC4D-201ENST00000275560 CASC1Q6TDU7 716 aa22.83■■□□□ 1.25
SSC4D-201ENST00000275560 TMX3Q96JJ7 454 aa22.83■■□□□ 1.24
SSC4D-201ENST00000275560 RIMS2Q9UQ26 1411 aa22.83■■□□□ 1.24
SSC4D-201ENST00000275560 POGZQ7Z3K3 1410 aa22.82■■□□□ 1.24
SSC4D-201ENST00000275560 NCKAP5LQ9HCH0 1330 aa22.81■■□□□ 1.24
SSC4D-201ENST00000275560 REREQ9P2R6 1566 aa22.81■■□□□ 1.24
SSC4D-201ENST00000275560 ERC2O15083 957 aa22.81■■□□□ 1.24
SSC4D-201ENST00000275560 AEBP1Q8IUX7 1158 aa22.81■■□□□ 1.24
SSC4D-201ENST00000275560 PALD1Q9ULE6 856 aa22.81■■□□□ 1.24
SSC4D-201ENST00000275560 REC8O95072 547 aa22.8■■□□□ 1.24
SSC4D-201ENST00000275560 RTL1A6NKG5 1358 aa22.8■■□□□ 1.24
SSC4D-201ENST00000275560 TERF1P54274 439 aa22.8■■□□□ 1.24
SSC4D-201ENST00000275560 MCM10Q7L590 875 aa22.8■■□□□ 1.24
SSC4D-201ENST00000275560 RGS12O14924 1447 aa22.8■■□□□ 1.24
SSC4D-201ENST00000275560 ZNF830Q96NB3 372 aaPredicted RBP22.79■■□□□ 1.24
SSC4D-201ENST00000275560 PTMAP06454 111 aaKnown RBP22.79■■□□□ 1.24
SSC4D-201ENST00000275560 TSC1Q92574 1164 aa22.79■■□□□ 1.24
SSC4D-201ENST00000275560 ARHGEF40Q8TER5 1519 aa22.78■■□□□ 1.24
SSC4D-201ENST00000275560 GADD45BO75293 160 aaPredicted RBP22.78■■□□□ 1.24
SSC4D-201ENST00000275560 RPAP2Q8IXW5 612 aaPredicted RBP22.78■■□□□ 1.24
SSC4D-201ENST00000275560 MIS18AQ9NYP9 233 aa22.78■■□□□ 1.24
SSC4D-201ENST00000275560 CCDC39Q9UFE4 941 aa22.78■■□□□ 1.24
SSC4D-201ENST00000275560 SLC4A10Q6U841 1118 aa22.77■■□□□ 1.24
SSC4D-201ENST00000275560 F6X3S4 739 aa22.77■■□□□ 1.24
SSC4D-201ENST00000275560 FBXO31Q5XUX0 539 aaPredicted RBP22.77■■□□□ 1.24
SSC4D-201ENST00000275560 EXOC6BQ9Y2D4 811 aa22.77■■□□□ 1.24
SSC4D-201ENST00000275560 YEATS2Q9ULM3 1422 aa22.76■■□□□ 1.23
SSC4D-201ENST00000275560 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.76■■□□□ 1.23
SSC4D-201ENST00000275560 CLTCQ00610 1675 aaKnown RBP22.76■■□□□ 1.23
SSC4D-201ENST00000275560 PRDM10Q9NQV6 1147 aa22.76■■□□□ 1.23
SSC4D-201ENST00000275560 PDE1AP54750 535 aa22.75■■□□□ 1.23
SSC4D-201ENST00000275560 UPF3BQ9BZI7 483 aaKnown RBP22.75■■□□□ 1.23
SSC4D-201ENST00000275560 C17orf53Q8N3J3 647 aaPredicted RBP22.75■■□□□ 1.23
SSC4D-201ENST00000275560 BRD1O95696 1058 aa22.74■■□□□ 1.23
SSC4D-201ENST00000275560 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
SSC4D-201ENST00000275560 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.74■■□□□ 1.23
SSC4D-201ENST00000275560 TSPY26PQ9H489 355 aa22.74■■□□□ 1.23
SSC4D-201ENST00000275560 MLH3Q9UHC1 1453 aa22.74■■□□□ 1.23
SSC4D-201ENST00000275560 G2E3Q7L622 706 aa22.73■■□□□ 1.23
SSC4D-201ENST00000275560 DTNBO60941 627 aa22.73■■□□□ 1.23
SSC4D-201ENST00000275560 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
SSC4D-201ENST00000275560 PRDM4Q9UKN5 801 aa22.73■■□□□ 1.23
SSC4D-201ENST00000275560 CSPP1Q1MSJ5 1256 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 SASS6Q6UVJ0 657 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 FAM177BA6PVY3 158 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 MBD3O95983 291 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
SSC4D-201ENST00000275560 DNTTIP2Q5QJE6 756 aaKnown RBP22.71■■□□□ 1.23
SSC4D-201ENST00000275560 SULT6B1Q6IMI4 303 aa22.71■■□□□ 1.23
SSC4D-201ENST00000275560 RILPL2Q969X0 211 aa22.71■■□□□ 1.23
SSC4D-201ENST00000275560 SLC52A1Q9NWF4 448 aa22.71■■□□□ 1.23
SSC4D-201ENST00000275560 DYNC1I1O14576 645 aa22.7■■□□□ 1.22
SSC4D-201ENST00000275560 ESYT1Q9BSJ8 1104 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 TRIM6-TRIM34B2RNG4 842 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 MCM5P33992 734 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 LARP6Q9BRS8 491 aaKnown RBP22.69■■□□□ 1.22
SSC4D-201ENST00000275560 USP25Q9UHP3 1055 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 TCHHQ07283 1943 aa22.69■■□□□ 1.22
SSC4D-201ENST00000275560 USP48Q86UV5 1035 aa22.68■■□□□ 1.22
SSC4D-201ENST00000275560 MAP7D2Q96T17 732 aa22.68■■□□□ 1.22
SSC4D-201ENST00000275560 IL25Q9H293 177 aa22.68■■□□□ 1.22
SSC4D-201ENST00000275560 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
SSC4D-201ENST00000275560 KIAA2012Q0VF49 1180 aa22.67■■□□□ 1.22
SSC4D-201ENST00000275560 UNC5CLQ8IV45 518 aa22.67■■□□□ 1.22
SSC4D-201ENST00000275560 TTC12Q9H892 705 aaPredicted RBP22.67■■□□□ 1.22
SSC4D-201ENST00000275560 COG3Q96JB2 828 aa22.67■■□□□ 1.22
SSC4D-201ENST00000275560 CHL1O00533 1208 aa22.66■■□□□ 1.22
SSC4D-201ENST00000275560 SOX12O15370 315 aa22.66■■□□□ 1.22
SSC4D-201ENST00000275560 CUL4AQ13619 759 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms