RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 ATP7BP35670 1465 aa12.41□□□□□ -0.42
RPS3A-201ENST00000274065 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
RPS3A-201ENST00000274065 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
RPS3A-201ENST00000274065 CPDO75976 1380 aa12.4□□□□□ -0.42
RPS3A-201ENST00000274065 PEAK1Q9H792 1746 aa12.4□□□□□ -0.43
RPS3A-201ENST00000274065 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.43
RPS3A-201ENST00000274065 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
RPS3A-201ENST00000274065 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
RPS3A-201ENST00000274065 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
RPS3A-201ENST00000274065 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
RPS3A-201ENST00000274065 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
RPS3A-201ENST00000274065 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
RPS3A-201ENST00000274065 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
RPS3A-201ENST00000274065 COL5A2P05997 1499 aaPredicted RBP12.38□□□□□ -0.43
RPS3A-201ENST00000274065 USP19O94966 1318 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 ACEP12821 1306 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 DDB1Q16531 1140 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
RPS3A-201ENST00000274065 CRB1P82279 1406 aa12.37□□□□□ -0.43
RPS3A-201ENST00000274065 GCP02774 474 aa12.36□□□□□ -0.43
RPS3A-201ENST00000274065 MARCH10Q8NA82 808 aaPredicted RBP12.36□□□□□ -0.43
RPS3A-201ENST00000274065 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
RPS3A-201ENST00000274065 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
RPS3A-201ENST00000274065 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
RPS3A-201ENST00000274065 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
RPS3A-201ENST00000274065 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
RPS3A-201ENST00000274065 ZBTB7CA1YPR0 619 aa12.34□□□□□ -0.43
RPS3A-201ENST00000274065 ARXQ96QS3 562 aa12.34□□□□□ -0.43
RPS3A-201ENST00000274065 CHD4Q14839 1912 aa12.34□□□□□ -0.43
RPS3A-201ENST00000274065 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
RPS3A-201ENST00000274065 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 BCL9O00512 1426 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
RPS3A-201ENST00000274065 GPR162Q16538 588 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
RPS3A-201ENST00000274065 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
RPS3A-201ENST00000274065 ST18O60284 1047 aa12.31□□□□□ -0.44
RPS3A-201ENST00000274065 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
RPS3A-201ENST00000274065 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
RPS3A-201ENST00000274065 TOPAZ1Q8N9V7 1692 aa12.29□□□□□ -0.44
RPS3A-201ENST00000274065 SNPHO15079 494 aa12.29□□□□□ -0.44
RPS3A-201ENST00000274065 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
RPS3A-201ENST00000274065 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
RPS3A-201ENST00000274065 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
RPS3A-201ENST00000274065 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
RPS3A-201ENST00000274065 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
RPS3A-201ENST00000274065 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
RPS3A-201ENST00000274065 SHANK3Q9BYB0 1731 aa12.27□□□□□ -0.45
RPS3A-201ENST00000274065 NLRP6P59044 892 aa12.26□□□□□ -0.45
RPS3A-201ENST00000274065 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
RPS3A-201ENST00000274065 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
RPS3A-201ENST00000274065 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
RPS3A-201ENST00000274065 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
RPS3A-201ENST00000274065 TMEM121BQ9BXQ6 578 aaPredicted RBP12.25□□□□□ -0.45
RPS3A-201ENST00000274065 PPIP5K1Q6PFW1 1433 aa12.25□□□□□ -0.45
RPS3A-201ENST00000274065 SLIT3O75094 1523 aa12.25□□□□□ -0.45
RPS3A-201ENST00000274065 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
RPS3A-201ENST00000274065 EXOC5O00471 708 aa12.24□□□□□ -0.45
RPS3A-201ENST00000274065 COL18A1P39060 1754 aa12.24□□□□□ -0.45
RPS3A-201ENST00000274065 CARD10Q9BWT7 1032 aa12.24□□□□□ -0.45
RPS3A-201ENST00000274065 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
RPS3A-201ENST00000274065 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
RPS3A-201ENST00000274065 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
RPS3A-201ENST00000274065 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
RPS3A-201ENST00000274065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
RPS3A-201ENST00000274065 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
RPS3A-201ENST00000274065 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
RPS3A-201ENST00000274065 CPSF1Q10570 1443 aaKnown RBP12.22□□□□□ -0.45
RPS3A-201ENST00000274065 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.454e-12■■□□□ 11.4
RPS3A-201ENST00000274065 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
RPS3A-201ENST00000274065 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
RPS3A-201ENST00000274065 USP6P35125 1406 aa12.21□□□□□ -0.45
RPS3A-201ENST00000274065 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
RPS3A-201ENST00000274065 BRD4O60885 1362 aaPredicted RBP12.21□□□□□ -0.45
RPS3A-201ENST00000274065 POLD1P28340 1107 aa12.21□□□□□ -0.45
RPS3A-201ENST00000274065 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 SOX12O15370 315 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
RPS3A-201ENST00000274065 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
RPS3A-201ENST00000274065 G3V3G9 751 aa12.19□□□□□ -0.46
RPS3A-201ENST00000274065 HSPA6P17066 643 aa12.19□□□□□ -0.46
RPS3A-201ENST00000274065 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
RPS3A-201ENST00000274065 PIK3C2AO00443 1686 aa12.18□□□□□ -0.46
RPS3A-201ENST00000274065 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
RPS3A-201ENST00000274065 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
RPS3A-201ENST00000274065 TRPM1Q7Z4N2 1603 aa12.17□□□□□ -0.46
RPS3A-201ENST00000274065 KCNQ4P56696 695 aa12.16□□□□□ -0.46
RPS3A-201ENST00000274065 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
RPS3A-201ENST00000274065 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms