RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 CSB-PGBD3P0DP91 1061 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 SPAG1Q07617 926 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 HSP90AB2PQ58FF8 381 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 NACAP1Q9BZK3 213 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 TDRD9Q8NDG6 1382 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 C10orf67Q8IYJ2 551 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 A0A0G2JS52 829 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 SPATS2Q86XZ4 545 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CCAR1Q8IX12 1150 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 UQCRHLA0A096LP55 91 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 UQCRHP07919 91 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 UBTFL1P0CB47 393 aaPredicted RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 PRPHP41219 470 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC181Q5TID7 509 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 KRT222Q8N1A0 295 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 MVPQ14764 893 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 CCDC43Q96MW1 224 aaKnown RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 USP25Q9UHP3 1055 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 VPS37CA5D8V6 355 aaPredicted RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 STAMBPO95630 424 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 POTEJP0CG39 1038 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 RILPL2Q969X0 211 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 BMP2KQ9NSY1 1161 aaPredicted RBP5.78□□□□□ -1.48
HMCN1-201ENST00000271588 ARHGEF12Q9NZN5 1544 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 GGT6Q6P531 493 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 HMG20BQ9P0W2 317 aa5.78□□□□□ -1.48
HMCN1-201ENST00000271588 GNAI2P04899 355 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 CASTP20810 708 aaKnown RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 GABPB1Q06547 395 aaPredicted RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 TTC14Q96N46 770 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 TROQ12816 1431 aaPredicted RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 KIF5CO60282 957 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 CCDC172P0C7W6 258 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 CLGNO14967 610 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 ANKRD18BA2A2Z9 1011 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 STK38Q15208 465 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 LMOD2Q6P5Q4 547 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 ATF7IPQ6VMQ6 1270 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 PPP1R2P41236 205 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 RIPK4P57078 832 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 C6orf163Q5TEZ5 329 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 NSRP1Q9H0G5 558 aaKnown RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 PPFIA3O75145 1194 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 SLC4A10Q6U841 1118 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 USO1O60763 962 aaKnown RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 ARHGAP29Q52LW3 1261 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 LRPPRCP42704 1394 aaKnown RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 RAB34Q9BZG1 259 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 NUTM1Q86Y26 1132 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 FAM114A1Q8IWE2 563 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 CTCFLQ8NI51 663 aaPredicted RBP5.77□□□□□ -1.49
HMCN1-201ENST00000271588 TRAF1Q13077 416 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 BMP2KLQ5H9B9 411 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 COG6Q9Y2V7 657 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 SLC52A1Q9NWF4 448 aa5.77□□□□□ -1.49
HMCN1-201ENST00000271588 SEPT7Q16181 437 aaKnown RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 CTAGE1Q96RT6 745 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 GNL3LQ9NVN8 582 aaKnown RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 IFT140Q96RY7 1462 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 AIMP1Q12904 312 aaKnown RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 SNX21Q969T3 373 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 RAD50Q92878 1312 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 EIF3DO15371 548 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 ARHGAP45Q92619 1136 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 ZSCAN16Q9H4T2 348 aaPredicted RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 TAF4BQ92750 862 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 SMAP1Q8IYB5 467 aaPredicted RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 FYB1O15117 783 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 FCHSD2O94868 740 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 UPF3BQ9BZI7 483 aaKnown RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 RBM27Q9P2N5 1060 aaKnown RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 U3KPZ7 1027 aaPredicted RBP5.76□□□□□ -1.49
HMCN1-201ENST00000271588 FMNL2Q96PY5 1086 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 CHMP3Q9Y3E7 222 aa5.76□□□□□ -1.49
HMCN1-201ENST00000271588 FAM135AQ9P2D6 1515 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 APAF1O14727 1248 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 ALS2CR12Q96Q35 445 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 TTC12Q9H892 705 aaPredicted RBP5.75□□□□□ -1.49
HMCN1-201ENST00000271588 SF3B2Q13435 895 aaKnown RBP5.75□□□□□ -1.49
HMCN1-201ENST00000271588 C9orf84Q5VXU9 1444 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 PAFAH1B1P43034 410 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 SERPINC1P01008 464 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 RBM33Q96EV2 1170 aaKnown RBP5.75□□□□□ -1.49
HMCN1-201ENST00000271588 DNMBPQ6XZF7 1577 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 ERBINQ96RT1 1412 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 APBB1O00213 710 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.75□□□□□ -1.49
HMCN1-201ENST00000271588 NFXL1Q6ZNB6 911 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 CCDC178Q5BJE1 867 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 PTPRCP08575 1304 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 FKBP5Q13451 457 aaPredicted RBP5.75□□□□□ -1.49
HMCN1-201ENST00000271588 STX1AQ16623 288 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 UHRF1BP1Q6BDS2 1440 aa5.75□□□□□ -1.49
HMCN1-201ENST00000271588 OPA1O60313 960 aa5.74□□□□□ -1.49
HMCN1-201ENST00000271588 SREK1Q8WXA9 508 aaKnown RBP5.74□□□□□ -1.49
HMCN1-201ENST00000271588 GLRX3O76003 335 aaKnown RBP5.74□□□□□ -1.49
HMCN1-201ENST00000271588 UBE2HP62256 183 aa5.74□□□□□ -1.49
HMCN1-201ENST00000271588 TRIM34Q9BYJ4 488 aa5.74□□□□□ -1.49
HMCN1-201ENST00000271588 GTF2F1P35269 517 aaKnown RBP eCLIP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms