RNA–Protein interactions for RNA: ENST00000269471.9

MBD1-202, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MBD1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-202ENST00000269471 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
MBD1-202ENST00000269471 VAMP4O75379 141 aa20.34■□□□□ 0.85
MBD1-202ENST00000269471 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
MBD1-202ENST00000269471 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.85
MBD1-202ENST00000269471 IGSF1Q8N6C5 1336 aa20.33■□□□□ 0.85
MBD1-202ENST00000269471 STRCP1A6NGW2 1772 aa20.33■□□□□ 0.85
MBD1-202ENST00000269471 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.84
MBD1-202ENST00000269471 ARXQ96QS3 562 aa20.33■□□□□ 0.84
MBD1-202ENST00000269471 SEC24BO95487 1268 aa20.32■□□□□ 0.84
MBD1-202ENST00000269471 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
MBD1-202ENST00000269471 TWISTNBQ3B726 338 aaPredicted RBP20.32■□□□□ 0.84
MBD1-202ENST00000269471 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
MBD1-202ENST00000269471 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
MBD1-202ENST00000269471 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
MBD1-202ENST00000269471 USP19O94966 1318 aa20.31■□□□□ 0.84
MBD1-202ENST00000269471 PCDHB15Q9Y5E8 787 aa20.31■□□□□ 0.84
MBD1-202ENST00000269471 MARF1Q9Y4F3 1742 aaKnown RBP20.31■□□□□ 0.84
MBD1-202ENST00000269471 RTF1Q92541 710 aaKnown RBP20.31■□□□□ 0.84
MBD1-202ENST00000269471 IP6K1Q92551 441 aa20.31■□□□□ 0.84
MBD1-202ENST00000269471 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
MBD1-202ENST00000269471 ARHGEF10O15013 1369 aa20.3■□□□□ 0.84
MBD1-202ENST00000269471 ATF7IPQ6VMQ6 1270 aa20.29■□□□□ 0.84
MBD1-202ENST00000269471 NWD1Q149M9 1564 aa20.29■□□□□ 0.84
MBD1-202ENST00000269471 TMEM57Q8N5G2 664 aa20.29■□□□□ 0.84
MBD1-202ENST00000269471 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
MBD1-202ENST00000269471 LMTK3Q96Q04 1460 aa20.28■□□□□ 0.84
MBD1-202ENST00000269471 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
MBD1-202ENST00000269471 CT47B1P0C2W7 299 aaPredicted RBP20.27■□□□□ 0.83
MBD1-202ENST00000269471 CHRNA2Q15822 529 aa20.27■□□□□ 0.83
MBD1-202ENST00000269471 NECTIN2Q92692 538 aa20.27■□□□□ 0.83
MBD1-202ENST00000269471 MST1RQ04912 1400 aa20.27■□□□□ 0.83
MBD1-202ENST00000269471 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
MBD1-202ENST00000269471 RRAGDQ9NQL2 400 aaPredicted RBP20.26■□□□□ 0.83
MBD1-202ENST00000269471 ARHGEF25Q86VW2 580 aa20.26■□□□□ 0.83
MBD1-202ENST00000269471 KDRP35968 1356 aa20.25■□□□□ 0.83
MBD1-202ENST00000269471 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
MBD1-202ENST00000269471 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
MBD1-202ENST00000269471 CHL1O00533 1208 aa20.24■□□□□ 0.83
MBD1-202ENST00000269471 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
MBD1-202ENST00000269471 ANKRD24Q8TF21 1146 aa20.24■□□□□ 0.83
MBD1-202ENST00000269471 MSH6P52701 1360 aa20.24■□□□□ 0.83
MBD1-202ENST00000269471 IL17REQ8NFR9 667 aa20.23■□□□□ 0.83
MBD1-202ENST00000269471 LTN1O94822 1766 aa20.23■□□□□ 0.83
MBD1-202ENST00000269471 GAS2L2Q8NHY3 880 aa20.23■□□□□ 0.83
MBD1-202ENST00000269471 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
MBD1-202ENST00000269471 NFAT5O94916 1531 aa20.22■□□□□ 0.83
MBD1-202ENST00000269471 BECN1Q14457 450 aa20.22■□□□□ 0.83
MBD1-202ENST00000269471 C1orf115Q9H7X2 142 aa20.22■□□□□ 0.83
MBD1-202ENST00000269471 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
MBD1-202ENST00000269471 ALDH1L2Q3SY69 923 aa20.21■□□□□ 0.83
MBD1-202ENST00000269471 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
MBD1-202ENST00000269471 KIF16BQ96L93 1317 aa20.2■□□□□ 0.82
MBD1-202ENST00000269471 CRB1P82279 1406 aa20.2■□□□□ 0.82
MBD1-202ENST00000269471 IPO8O15397 1037 aaKnown RBP20.19■□□□□ 0.82
MBD1-202ENST00000269471 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
MBD1-202ENST00000269471 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
MBD1-202ENST00000269471 STRCQ7RTU9 1775 aa20.18■□□□□ 0.82
MBD1-202ENST00000269471 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
MBD1-202ENST00000269471 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
MBD1-202ENST00000269471 NPHP3Q7Z494 1330 aa20.17■□□□□ 0.82
MBD1-202ENST00000269471 RGPD2P0DJD1 1756 aa20.16■□□□□ 0.82
MBD1-202ENST00000269471 KIF24Q5T7B8 1368 aa20.16■□□□□ 0.82
MBD1-202ENST00000269471 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
MBD1-202ENST00000269471 RTL1A6NKG5 1358 aa20.16■□□□□ 0.82
MBD1-202ENST00000269471 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
MBD1-202ENST00000269471 GZF1Q9H116 711 aaPredicted RBP20.16■□□□□ 0.82
MBD1-202ENST00000269471 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
MBD1-202ENST00000269471 ANTXR1Q9H6X2 564 aa20.15■□□□□ 0.82
MBD1-202ENST00000269471 DDX19BQ9UMR2 479 aa20.15■□□□□ 0.82
MBD1-202ENST00000269471 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
MBD1-202ENST00000269471 VIRMAQ69YN4 1812 aaKnown RBP20.14■□□□□ 0.82
MBD1-202ENST00000269471 G2E3Q7L622 706 aa20.14■□□□□ 0.82
MBD1-202ENST00000269471 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
MBD1-202ENST00000269471 KCNQ3O43525 872 aa20.13■□□□□ 0.81
MBD1-202ENST00000269471 TRPM3Q9HCF6 1732 aaPredicted RBP20.12■□□□□ 0.81
MBD1-202ENST00000269471 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
MBD1-202ENST00000269471 F6X3S4 739 aa20.12■□□□□ 0.81
MBD1-202ENST00000269471 TBC1D2Q9BYX2 928 aa20.12■□□□□ 0.81
MBD1-202ENST00000269471 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
MBD1-202ENST00000269471 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
MBD1-202ENST00000269471 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
MBD1-202ENST00000269471 ERBB3P21860 1342 aa20.11■□□□□ 0.81
MBD1-202ENST00000269471 SPATA31A3Q5VYP0 1347 aa20.11■□□□□ 0.81
MBD1-202ENST00000269471 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
MBD1-202ENST00000269471 XRCC6P12956 609 aaKnown RBP eCLIP20.1■□□□□ 0.812e-6■■■■■ 29.9
MBD1-202ENST00000269471 PDZRN3Q9UPQ7 1066 aa20.1■□□□□ 0.81
MBD1-202ENST00000269471 KIAA0232Q92628 1395 aa20.1■□□□□ 0.81
MBD1-202ENST00000269471 TAF7Q15545 349 aaPredicted RBP20.1■□□□□ 0.81
MBD1-202ENST00000269471 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
MBD1-202ENST00000269471 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
MBD1-202ENST00000269471 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
MBD1-202ENST00000269471 USP54Q70EL1 1684 aa20.09■□□□□ 0.81
MBD1-202ENST00000269471 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
MBD1-202ENST00000269471 ZBTB7BO15156 539 aaPredicted RBP20.09■□□□□ 0.81
MBD1-202ENST00000269471 XIRP1Q702N8 1843 aaKnown RBP20.08■□□□□ 0.81
MBD1-202ENST00000269471 SLIT3O75094 1523 aa20.08■□□□□ 0.81
MBD1-202ENST00000269471 PLEKHO1Q53GL0 409 aaPredicted RBP20.08■□□□□ 0.81
MBD1-202ENST00000269471 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.81
MBD1-202ENST00000269471 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
MBD1-202ENST00000269471 DCCP43146 1447 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms