RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PLCH1Q4KWH8 1693 aa24.35■■□□□ 1.49
COL4A3BP-201ENST00000261415 LAS1LQ9Y4W2 734 aaKnown RBP24.35■■□□□ 1.49
COL4A3BP-201ENST00000261415 COL5A2P05997 1499 aaPredicted RBP24.34■■□□□ 1.49
COL4A3BP-201ENST00000261415 NFE2L2Q16236 605 aa24.34■■□□□ 1.49
COL4A3BP-201ENST00000261415 CDCA7LQ96GN5 454 aa24.33■■□□□ 1.49
COL4A3BP-201ENST00000261415 RIPK4P57078 832 aa24.33■■□□□ 1.49
COL4A3BP-201ENST00000261415 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
COL4A3BP-201ENST00000261415 FAM83GA6ND36 823 aa24.32■■□□□ 1.48
COL4A3BP-201ENST00000261415 GOLGA2Q08379 1002 aa24.32■■□□□ 1.48
COL4A3BP-201ENST00000261415 ZMYND15Q9H091 742 aa24.31■■□□□ 1.48
COL4A3BP-201ENST00000261415 TRIM35Q9UPQ4 493 aa24.31■■□□□ 1.48
COL4A3BP-201ENST00000261415 DAXXQ9UER7 740 aaPredicted RBP24.31■■□□□ 1.48
COL4A3BP-201ENST00000261415 PODXL2Q9NZ53 605 aa24.3■■□□□ 1.48
COL4A3BP-201ENST00000261415 JCADQ9P266 1359 aa24.3■■□□□ 1.48
COL4A3BP-201ENST00000261415 CSB-PGBD3P0DP91 1061 aa24.3■■□□□ 1.48
COL4A3BP-201ENST00000261415 NLRP2Q9NX02 1062 aa24.28■■□□□ 1.48
COL4A3BP-201ENST00000261415 WDR17Q8IZU2 1322 aa24.28■■□□□ 1.48
COL4A3BP-201ENST00000261415 NRAPQ86VF7 1730 aa24.27■■□□□ 1.48
COL4A3BP-201ENST00000261415 WDR63Q8IWG1 891 aa24.27■■□□□ 1.48
COL4A3BP-201ENST00000261415 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
COL4A3BP-201ENST00000261415 MTHFSDQ2M296 383 aaKnown RBP24.26■■□□□ 1.47
COL4A3BP-201ENST00000261415 PARP4Q9UKK3 1724 aaKnown RBP24.26■■□□□ 1.47
COL4A3BP-201ENST00000261415 SLFN5Q08AF3 891 aa24.26■■□□□ 1.47
COL4A3BP-201ENST00000261415 SPINK5Q9NQ38 1064 aaPredicted RBP24.26■■□□□ 1.47
COL4A3BP-201ENST00000261415 NUTM2BA6NNL0 878 aaPredicted RBP24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 NUTM2EB1AL46 878 aaPredicted RBP24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 ADAMTS2O95450 1211 aa24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 NUTM2AQ8IVF1 878 aaPredicted RBP24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 BTG4Q9NY30 223 aa24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 PKD1L3Q7Z443 1732 aa24.24■■□□□ 1.47
COL4A3BP-201ENST00000261415 E9PSI1 815 aa24.23■■□□□ 1.47
COL4A3BP-201ENST00000261415 HSPA1LP34931 641 aa24.23■■□□□ 1.47
COL4A3BP-201ENST00000261415 LMOD3Q0VAK6 560 aa24.23■■□□□ 1.47
COL4A3BP-201ENST00000261415 VSIG10Q8N0Z9 540 aa24.23■■□□□ 1.47
COL4A3BP-201ENST00000261415 GAS2L2Q8NHY3 880 aa24.23■■□□□ 1.47
COL4A3BP-201ENST00000261415 RNF123Q5XPI4 1314 aa24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 TCERG1O14776 1098 aaKnown RBP24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 DUSP27Q5VZP5 1158 aa24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 TRMT2AQ8IZ69 625 aaKnown RBP24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 MEGF6O75095 1541 aa24.22■■□□□ 1.47
COL4A3BP-201ENST00000261415 TOM1L2Q6ZVM7 507 aa24.21■■□□□ 1.47
COL4A3BP-201ENST00000261415 DDRGK1Q96HY6 314 aa24.21■■□□□ 1.47
COL4A3BP-201ENST00000261415 WNK3Q9BYP7 1800 aa24.21■■□□□ 1.47
COL4A3BP-201ENST00000261415 EVA1CP58658 441 aa24.21■■□□□ 1.47
COL4A3BP-201ENST00000261415 LRRC37A3O60309 1634 aa24.2■■□□□ 1.47
COL4A3BP-201ENST00000261415 LARP1Q6PKG0 1096 aaKnown RBP24.19■■□□□ 1.46
COL4A3BP-201ENST00000261415 CRB1P82279 1406 aa24.19■■□□□ 1.46
COL4A3BP-201ENST00000261415 NPM2Q86SE8 214 aaKnown RBP24.19■■□□□ 1.46
COL4A3BP-201ENST00000261415 RAPGEF4Q8WZA2 1011 aa24.18■■□□□ 1.46
COL4A3BP-201ENST00000261415 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
COL4A3BP-201ENST00000261415 IL16Q14005 1332 aa24.18■■□□□ 1.46
COL4A3BP-201ENST00000261415 SPATA31A6Q5VVP1 1343 aa24.18■■□□□ 1.46
COL4A3BP-201ENST00000261415 FRAT1Q92837 279 aaPredicted RBP24.18■■□□□ 1.46
COL4A3BP-201ENST00000261415 LRP6O75581 1613 aa24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 CARD10Q9BWT7 1032 aa24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 DCTN1Q14203 1278 aa24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 PLEKHO1Q53GL0 409 aaPredicted RBP24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 MAP3K5Q99683 1374 aa24.17■■□□□ 1.46
COL4A3BP-201ENST00000261415 AMOTQ4VCS5 1084 aa24.16■■□□□ 1.46
COL4A3BP-201ENST00000261415 SHANK3Q9BYB0 1731 aa24.16■■□□□ 1.46
COL4A3BP-201ENST00000261415 SLIT2O94813 1529 aa24.15■■□□□ 1.46
COL4A3BP-201ENST00000261415 TATP17735 454 aaPredicted RBP24.15■■□□□ 1.46
COL4A3BP-201ENST00000261415 CALD1Q05682 793 aaKnown RBP24.15■■□□□ 1.46
COL4A3BP-201ENST00000261415 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.46
COL4A3BP-201ENST00000261415 MCM10Q7L590 875 aa24.14■■□□□ 1.46
COL4A3BP-201ENST00000261415 MS4A1P11836 297 aa24.14■■□□□ 1.45
COL4A3BP-201ENST00000261415 RTF1Q92541 710 aaKnown RBP24.14■■□□□ 1.45
COL4A3BP-201ENST00000261415 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
COL4A3BP-201ENST00000261415 SCN11AQ9UI33 1791 aa24.14■■□□□ 1.45
COL4A3BP-201ENST00000261415 NFKBIBQ15653 356 aa24.13■■□□□ 1.45
COL4A3BP-201ENST00000261415 OVOS2A0A0G2JMS6 1433 aa24.13■■□□□ 1.45
COL4A3BP-201ENST00000261415 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
COL4A3BP-201ENST00000261415 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
COL4A3BP-201ENST00000261415 ADAMTS7Q9UKP4 1686 aa24.12■■□□□ 1.45
COL4A3BP-201ENST00000261415 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.11■■□□□ 1.45
COL4A3BP-201ENST00000261415 PDE4AP27815 886 aa24.11■■□□□ 1.45
COL4A3BP-201ENST00000261415 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
COL4A3BP-201ENST00000261415 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
COL4A3BP-201ENST00000261415 BACH2Q9BYV9 841 aa24.1■■□□□ 1.45
COL4A3BP-201ENST00000261415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.1■■□□□ 1.455e-7■■■□□ 16.6
COL4A3BP-201ENST00000261415 SIPA1L3O60292 1781 aaPredicted RBP24.1■■□□□ 1.45
COL4A3BP-201ENST00000261415 RRP9O43818 475 aaKnown RBP24.09■■□□□ 1.45
COL4A3BP-201ENST00000261415 IFT57Q9NWB7 429 aa24.09■■□□□ 1.45
COL4A3BP-201ENST00000261415 GNAI1P63096 354 aa24.08■■□□□ 1.45
COL4A3BP-201ENST00000261415 C1orf141Q5JVX7 400 aa24.08■■□□□ 1.45
COL4A3BP-201ENST00000261415 C8orf37Q96NL8 207 aa24.08■■□□□ 1.45
COL4A3BP-201ENST00000261415 RCAN3Q9UKA8 241 aa24.08■■□□□ 1.45
COL4A3BP-201ENST00000261415 SPG7Q9UQ90 795 aa24.08■■□□□ 1.45
COL4A3BP-201ENST00000261415 ZNF853P0CG23 659 aa24.08■■□□□ 1.44
COL4A3BP-201ENST00000261415 IL2RBP14784 551 aa24.08■■□□□ 1.44
COL4A3BP-201ENST00000261415 CFAP44Q96MT7 982 aa24.08■■□□□ 1.44
COL4A3BP-201ENST00000261415 IL17REQ8NFR9 667 aa24.07■■□□□ 1.44
COL4A3BP-201ENST00000261415 CEMIPQ8WUJ3 1361 aa24.06■■□□□ 1.44
COL4A3BP-201ENST00000261415 NGLY1Q96IV0 654 aa24.05■■□□□ 1.44
COL4A3BP-201ENST00000261415 DISP2A7MBM2 1401 aa24.04■■□□□ 1.44
COL4A3BP-201ENST00000261415 BCL9LQ86UU0 1499 aa24.04■■□□□ 1.44
COL4A3BP-201ENST00000261415 HSP90AA2PQ14568 343 aaPredicted RBP24.04■■□□□ 1.44
COL4A3BP-201ENST00000261415 MBIPQ9NS73 344 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms