RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
EGR1-201ENST00000239938 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
EGR1-201ENST00000239938 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
EGR1-201ENST00000239938 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
EGR1-201ENST00000239938 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
EGR1-201ENST00000239938 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
EGR1-201ENST00000239938 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
EGR1-201ENST00000239938 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
EGR1-201ENST00000239938 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
EGR1-201ENST00000239938 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
EGR1-201ENST00000239938 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
EGR1-201ENST00000239938 APBB1O00213 710 aa17.1■□□□□ 0.33
EGR1-201ENST00000239938 ZNF500O60304 480 aaPredicted RBP17.1■□□□□ 0.33
EGR1-201ENST00000239938 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.1■□□□□ 0.33
EGR1-201ENST00000239938 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
EGR1-201ENST00000239938 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
EGR1-201ENST00000239938 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
EGR1-201ENST00000239938 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
EGR1-201ENST00000239938 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
EGR1-201ENST00000239938 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
EGR1-201ENST00000239938 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
EGR1-201ENST00000239938 NME9Q86XW9 330 aa17.09■□□□□ 0.33
EGR1-201ENST00000239938 SYCE3A1L190 88 aa17.07■□□□□ 0.32
EGR1-201ENST00000239938 TERF1P54274 439 aa17.07■□□□□ 0.32
EGR1-201ENST00000239938 DIP2CQ9Y2E4 1556 aa17.07■□□□□ 0.32
EGR1-201ENST00000239938 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
EGR1-201ENST00000239938 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
EGR1-201ENST00000239938 RTL1A6NKG5 1358 aa17.07■□□□□ 0.32
EGR1-201ENST00000239938 MSH6P52701 1360 aa17.07■□□□□ 0.32
EGR1-201ENST00000239938 ST18O60284 1047 aa17.06■□□□□ 0.32
EGR1-201ENST00000239938 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
EGR1-201ENST00000239938 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
EGR1-201ENST00000239938 MEIS3Q99687 375 aa17.06■□□□□ 0.32
EGR1-201ENST00000239938 ATP7BP35670 1465 aa17.06■□□□□ 0.32
EGR1-201ENST00000239938 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
EGR1-201ENST00000239938 PREX1Q8TCU6 1659 aa17.06■□□□□ 0.32
EGR1-201ENST00000239938 RPAP2Q8IXW5 612 aaPredicted RBP17.05■□□□□ 0.32
EGR1-201ENST00000239938 ZKSCAN5Q9Y2L8 839 aa17.05■□□□□ 0.32
EGR1-201ENST00000239938 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
EGR1-201ENST00000239938 MPNDQ8N594 471 aa17.05■□□□□ 0.32
EGR1-201ENST00000239938 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
EGR1-201ENST00000239938 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
EGR1-201ENST00000239938 ERC2O15083 957 aa17.03■□□□□ 0.32
EGR1-201ENST00000239938 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
EGR1-201ENST00000239938 AEBP1Q8IUX7 1158 aa17.03■□□□□ 0.32
EGR1-201ENST00000239938 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
EGR1-201ENST00000239938 REC8O95072 547 aa17.02■□□□□ 0.31
EGR1-201ENST00000239938 RNF214Q8ND24 703 aa17.02■□□□□ 0.31
EGR1-201ENST00000239938 CPS1P31327 1500 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 UQCRHP07919 91 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 NEK4P51957 841 aa17.01■□□□□ 0.31
EGR1-201ENST00000239938 PDE1AP54750 535 aa17■□□□□ 0.31
EGR1-201ENST00000239938 MCM10Q7L590 875 aa17■□□□□ 0.31
EGR1-201ENST00000239938 PALD1Q9ULE6 856 aa17■□□□□ 0.31
EGR1-201ENST00000239938 EDC4Q6P2E9 1401 aaKnown RBP17■□□□□ 0.31
EGR1-201ENST00000239938 CHL1O00533 1208 aa17■□□□□ 0.31
EGR1-201ENST00000239938 BRD1O95696 1058 aa17■□□□□ 0.31
EGR1-201ENST00000239938 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
EGR1-201ENST00000239938 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
EGR1-201ENST00000239938 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
EGR1-201ENST00000239938 RIMBP3CA6NJZ7 1639 aa16.98■□□□□ 0.31
EGR1-201ENST00000239938 RIMBP3BA6NNM3 1639 aa16.98■□□□□ 0.31
EGR1-201ENST00000239938 RIMBP3Q9UFD9 1639 aa16.98■□□□□ 0.31
EGR1-201ENST00000239938 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
EGR1-201ENST00000239938 CUL4AQ13619 759 aa16.97■□□□□ 0.31
EGR1-201ENST00000239938 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
EGR1-201ENST00000239938 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
EGR1-201ENST00000239938 G2E3Q7L622 706 aa16.97■□□□□ 0.31
EGR1-201ENST00000239938 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
EGR1-201ENST00000239938 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
EGR1-201ENST00000239938 MCM5P33992 734 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 PTPRCP08575 1304 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 F6X3S4 739 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.31
EGR1-201ENST00000239938 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
EGR1-201ENST00000239938 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
EGR1-201ENST00000239938 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
EGR1-201ENST00000239938 COG3Q96JB2 828 aa16.95■□□□□ 0.3
EGR1-201ENST00000239938 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
EGR1-201ENST00000239938 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
EGR1-201ENST00000239938 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
EGR1-201ENST00000239938 MBD3O95983 291 aa16.94■□□□□ 0.3
EGR1-201ENST00000239938 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
EGR1-201ENST00000239938 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
EGR1-201ENST00000239938 RICTORQ6R327 1708 aa16.94■□□□□ 0.3
EGR1-201ENST00000239938 CSPP1Q1MSJ5 1256 aa16.93■□□□□ 0.3
EGR1-201ENST00000239938 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.93■□□□□ 0.3
EGR1-201ENST00000239938 TSC1Q92574 1164 aa16.93■□□□□ 0.3
EGR1-201ENST00000239938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
EGR1-201ENST00000239938 MON2Q7Z3U7 1717 aa16.93■□□□□ 0.3
EGR1-201ENST00000239938 IL25Q9H293 177 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms