RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ELL2O00472 640 aaPredicted RBP29.6■■■□□ 2.33
MSX2-201ENST00000239243 KRT28Q7Z3Y7 464 aa29.6■■■□□ 2.33
MSX2-201ENST00000239243 SKAP1Q86WV1 359 aa29.6■■■□□ 2.33
MSX2-201ENST00000239243 LTV1Q96GA3 475 aaPredicted RBP29.59■■■□□ 2.33
MSX2-201ENST00000239243 ANP32AP39687 249 aaKnown RBP29.59■■■□□ 2.33
MSX2-201ENST00000239243 USP19O94966 1318 aa29.58■■■□□ 2.33
MSX2-201ENST00000239243 GCP02774 474 aa29.57■■■□□ 2.32
MSX2-201ENST00000239243 LRRC37A3O60309 1634 aa29.57■■■□□ 2.32
MSX2-201ENST00000239243 GNAT3A8MTJ3 354 aa29.56■■■□□ 2.32
MSX2-201ENST00000239243 XPCQ01831 940 aaPredicted RBP29.56■■■□□ 2.32
MSX2-201ENST00000239243 API5Q9BZZ5 524 aaKnown RBP29.56■■■□□ 2.32
MSX2-201ENST00000239243 RGS3P49796 1198 aa29.55■■■□□ 2.32
MSX2-201ENST00000239243 CADPS2Q86UW7 1296 aa29.55■■■□□ 2.32
MSX2-201ENST00000239243 ARHGEF25Q86VW2 580 aa29.54■■■□□ 2.32
MSX2-201ENST00000239243 ZBTB40Q9NUA8 1239 aa29.54■■■□□ 2.32
MSX2-201ENST00000239243 MAP3K5Q99683 1374 aa29.54■■■□□ 2.32
MSX2-201ENST00000239243 HSPA2P54652 639 aa29.53■■■□□ 2.32
MSX2-201ENST00000239243 HDAC1Q13547 482 aaPredicted RBP29.53■■■□□ 2.32
MSX2-201ENST00000239243 LMOD2Q6P5Q4 547 aa29.53■■■□□ 2.32
MSX2-201ENST00000239243 ALS2Q96Q42 1657 aa29.53■■■□□ 2.32
MSX2-201ENST00000239243 FAM161AQ3B820 660 aa29.52■■■□□ 2.32
MSX2-201ENST00000239243 TSPYL4Q9UJ04 414 aa29.52■■■□□ 2.32
MSX2-201ENST00000239243 ABCC4O15439 1325 aa29.52■■■□□ 2.32
MSX2-201ENST00000239243 MSH6P52701 1360 aa29.51■■■□□ 2.31
MSX2-201ENST00000239243 ZBTB7CA1YPR0 619 aa29.49■■■□□ 2.31
MSX2-201ENST00000239243 BABAM1Q9NWV8 329 aa29.49■■■□□ 2.31
MSX2-201ENST00000239243 NBPF6Q5VWK0 638 aa29.48■■■□□ 2.31
MSX2-201ENST00000239243 NBPF4Q96M43 638 aa29.48■■■□□ 2.31
MSX2-201ENST00000239243 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
MSX2-201ENST00000239243 USHBP1Q8N6Y0 703 aa29.47■■■□□ 2.31
MSX2-201ENST00000239243 NPHP3Q7Z494 1330 aa29.46■■■□□ 2.31
MSX2-201ENST00000239243 NCAPD2Q15021 1401 aa29.46■■■□□ 2.31
MSX2-201ENST00000239243 PTPRCP08575 1304 aa29.45■■■□□ 2.3
MSX2-201ENST00000239243 SOS1Q07889 1333 aaPredicted RBP29.45■■■□□ 2.3
MSX2-201ENST00000239243 ZBTB7BO15156 539 aaPredicted RBP29.44■■■□□ 2.3
MSX2-201ENST00000239243 MSH5O43196 834 aa29.44■■■□□ 2.3
MSX2-201ENST00000239243 KRT24Q2M2I5 525 aa29.44■■■□□ 2.3
MSX2-201ENST00000239243 PDZRN3Q9UPQ7 1066 aa29.44■■■□□ 2.3
MSX2-201ENST00000239243 CAMTA1Q9Y6Y1 1673 aa29.42■■■□□ 2.3
MSX2-201ENST00000239243 KDM4FA0A1W2PPD8 638 aa29.42■■■□□ 2.3
MSX2-201ENST00000239243 C8orf34Q49A92 452 aa29.42■■■□□ 2.3
MSX2-201ENST00000239243 RGPD2P0DJD1 1756 aa29.42■■■□□ 2.3
MSX2-201ENST00000239243 STRCQ7RTU9 1775 aa29.41■■■□□ 2.3
MSX2-201ENST00000239243 MIS18AQ9NYP9 233 aa29.41■■■□□ 2.3
MSX2-201ENST00000239243 TAF7Q15545 349 aaPredicted RBP29.41■■■□□ 2.3
MSX2-201ENST00000239243 IL17REQ8NFR9 667 aa29.41■■■□□ 2.3
MSX2-201ENST00000239243 ANKRD24Q8TF21 1146 aa29.41■■■□□ 2.3
MSX2-201ENST00000239243 IPO9Q96P70 1041 aaKnown RBP29.41■■■□□ 2.3
MSX2-201ENST00000239243 MED1Q15648 1581 aaPredicted RBP29.41■■■□□ 2.3
MSX2-201ENST00000239243 AMOTQ4VCS5 1084 aa29.4■■■□□ 2.3
MSX2-201ENST00000239243 PLEKHO1Q53GL0 409 aaPredicted RBP29.39■■■□□ 2.3
MSX2-201ENST00000239243 SMC5Q8IY18 1101 aa29.39■■■□□ 2.3
MSX2-201ENST00000239243 XIRP1Q702N8 1843 aaKnown RBP29.38■■■□□ 2.29
MSX2-201ENST00000239243 TNS3Q68CZ2 1445 aa29.38■■■□□ 2.29
MSX2-201ENST00000239243 VIRMAQ69YN4 1812 aaKnown RBP29.38■■■□□ 2.29
MSX2-201ENST00000239243 LRRC59Q96AG4 307 aaKnown RBP29.38■■■□□ 2.29
MSX2-201ENST00000239243 CEMIPQ8WUJ3 1361 aa29.38■■■□□ 2.29
MSX2-201ENST00000239243 INTS3Q68E01 1043 aaKnown RBP29.37■■■□□ 2.29
MSX2-201ENST00000239243 LMO7Q8WWI1 1683 aa29.37■■■□□ 2.29
MSX2-201ENST00000239243 ERICH6Q7L0X2 663 aa29.36■■■□□ 2.29
MSX2-201ENST00000239243 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
MSX2-201ENST00000239243 PLEKHG5O94827 1062 aa29.35■■■□□ 2.29
MSX2-201ENST00000239243 AKAP4Q5JQC9 854 aa29.35■■■□□ 2.29
MSX2-201ENST00000239243 RGS12O14924 1447 aa29.35■■■□□ 2.29
MSX2-201ENST00000239243 SLC4A2P04920 1241 aa29.35■■■□□ 2.29
MSX2-201ENST00000239243 PXDNQ92626 1479 aa29.34■■■□□ 2.29
MSX2-201ENST00000239243 ABCC6O95255 1503 aa29.34■■■□□ 2.29
MSX2-201ENST00000239243 STK31Q9BXU1 1019 aa29.34■■■□□ 2.29
MSX2-201ENST00000239243 ERBB3P21860 1342 aa29.32■■■□□ 2.28
MSX2-201ENST00000239243 CCDC30Q5VVM6 783 aa29.32■■■□□ 2.28
MSX2-201ENST00000239243 ZNF530Q6P9A1 599 aaPredicted RBP29.32■■■□□ 2.28
MSX2-201ENST00000239243 AXIN2Q9Y2T1 843 aa29.32■■■□□ 2.28
MSX2-201ENST00000239243 OVOS2A0A0G2JMS6 1433 aa29.31■■■□□ 2.28
MSX2-201ENST00000239243 ZC3H6P61129 1189 aaKnown RBP29.3■■■□□ 2.28
MSX2-201ENST00000239243 DDX17Q92841 729 aaKnown RBP29.3■■■□□ 2.28
MSX2-201ENST00000239243 GCC1Q96CN9 775 aa29.3■■■□□ 2.28
MSX2-201ENST00000239243 FAM208AQ9UK61 1670 aaKnown RBP29.3■■■□□ 2.28
MSX2-201ENST00000239243 RGPD5Q99666 1765 aa29.3■■■□□ 2.28
MSX2-201ENST00000239243 SPATA31A3Q5VYP0 1347 aa29.3■■■□□ 2.28
MSX2-201ENST00000239243 C1orf141Q5JVX7 400 aa29.29■■■□□ 2.28
MSX2-201ENST00000239243 NOP58Q9Y2X3 529 aaKnown RBP29.29■■■□□ 2.28
MSX2-201ENST00000239243 CACNA1FO60840 1977 aa29.29■■■□□ 2.28
MSX2-201ENST00000239243 CHMP4AQ9BY43 222 aa29.29■■■□□ 2.28
MSX2-201ENST00000239243 DDRGK1Q96HY6 314 aa29.26■■■□□ 2.27
MSX2-201ENST00000239243 ZBTB47Q9UFB7 747 aaPredicted RBP29.26■■■□□ 2.27
MSX2-201ENST00000239243 CRYBG1Q9Y4K1 1723 aa29.26■■■□□ 2.27
MSX2-201ENST00000239243 KDM3BQ7LBC6 1761 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 NUCB1Q02818 461 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 TEFQ10587 303 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 BRINP3Q76B58 766 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 ANP32EQ9BTT0 268 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 COL18A1P39060 1754 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 PLEKHG2Q9H7P9 1386 aa29.25■■■□□ 2.27
MSX2-201ENST00000239243 C1orf115Q9H7X2 142 aa29.24■■■□□ 2.27
MSX2-201ENST00000239243 CCT4P50991 539 aaKnown RBP29.24■■■□□ 2.27
MSX2-201ENST00000239243 HOXB7P09629 217 aa29.23■■■□□ 2.27
MSX2-201ENST00000239243 LGR6Q9HBX8 967 aa29.23■■■□□ 2.27
MSX2-201ENST00000239243 CPDO75976 1380 aa29.22■■■□□ 2.27
MSX2-201ENST00000239243 ZNF335Q9H4Z2 1342 aaPredicted RBP29.22■■■□□ 2.27
MSX2-201ENST00000239243 RNMTO43148 476 aaKnown RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms