RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 BOLA2Q9H3K6 86 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 TBC1D2BQ9UPU7 963 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 CCDC83Q8IWF9 413 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 WASLO00401 505 aaPredicted RBP20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 CCDC192P0DO97 292 aa20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 ANXA1P04083 346 aa20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 AMOTL1Q8IY63 956 aa20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 NAT10Q9H0A0 1025 aaKnown RBP20.4■□□□□ 0.86
SLC1A4-201ENST00000234256 ABCC11Q96J66 1382 aa20.39■□□□□ 0.86
SLC1A4-201ENST00000234256 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 FOXO3O43524 673 aa20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
SLC1A4-201ENST00000234256 CFAP43Q8NDM7 1665 aa20.38■□□□□ 0.85
SLC1A4-201ENST00000234256 LETM1O95202 739 aaPredicted RBP20.38■□□□□ 0.85
SLC1A4-201ENST00000234256 CCDC158Q5M9N0 1113 aa20.38■□□□□ 0.85
SLC1A4-201ENST00000234256 CCDC8Q9H0W5 538 aaPredicted RBP20.38■□□□□ 0.85
SLC1A4-201ENST00000234256 ADGRL1O94910 1474 aa20.38■□□□□ 0.85
SLC1A4-201ENST00000234256 PER1O15534 1290 aaPredicted RBP20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 FILIP1Q7Z7B0 1213 aa20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 PLEKHH1Q9ULM0 1364 aa20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
SLC1A4-201ENST00000234256 TPM2P07951 284 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 TTC39AQ5SRH9 613 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 SPATA32Q96LK8 384 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 CARD14Q9BXL6 1004 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 CEP126Q9P2H0 1117 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 CAMK4Q16566 473 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 C8orf34Q49A92 452 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 BMP2KLQ5H9B9 411 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 CEP89Q96ST8 783 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 KIF14Q15058 1648 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 FLIIQ13045 1269 aa20.36■□□□□ 0.85
SLC1A4-201ENST00000234256 SEC24BO95487 1268 aa20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 HSP90AB2PQ58FF8 381 aa20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 AEBP1Q8IUX7 1158 aa20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 GLRX3O76003 335 aaKnown RBP20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
SLC1A4-201ENST00000234256 ANKRD1Q15327 319 aa20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 CCDC47Q96A33 483 aaKnown RBP20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 MEIS3Q99687 375 aa20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 ZRANB1Q9UGI0 708 aa20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
SLC1A4-201ENST00000234256 ANKLE2Q86XL3 938 aa20.33■□□□□ 0.85
SLC1A4-201ENST00000234256 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
SLC1A4-201ENST00000234256 ZNF396Q96N95 335 aaPredicted RBP20.33■□□□□ 0.84
SLC1A4-201ENST00000234256 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
SLC1A4-201ENST00000234256 ZSCAN30Q86W11 494 aa20.32■□□□□ 0.84
SLC1A4-201ENST00000234256 NUP62CLQ9H1M0 184 aa20.32■□□□□ 0.84
SLC1A4-201ENST00000234256 GPS2Q13227 327 aa20.32■□□□□ 0.84
SLC1A4-201ENST00000234256 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 FAM177A1Q8N128 213 aaPredicted RBP20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
SLC1A4-201ENST00000234256 ATP10BO94823 1461 aa20.3■□□□□ 0.84
SLC1A4-201ENST00000234256 XBP1P17861 261 aa20.3■□□□□ 0.84
SLC1A4-201ENST00000234256 TSPYL6Q8N831 410 aa20.3■□□□□ 0.84
SLC1A4-201ENST00000234256 NUP133Q8WUM0 1156 aa20.3■□□□□ 0.84
SLC1A4-201ENST00000234256 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
SLC1A4-201ENST00000234256 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 NAP1L1P55209 391 aaKnown RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 ZSCAN31Q96LW9 406 aaPredicted RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 PRAG1Q86YV5 1406 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 PI4KAP2A4QPH2 592 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 SERPINC1P01008 464 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 PI4KAP1Q8N8J0 262 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
SLC1A4-201ENST00000234256 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 NUP153P49790 1475 aaKnown RBP20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 RAPGEF6Q8TEU7 1601 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 UQCRHLA0A096LP55 91 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 UQCRHP07919 91 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 TRIM34Q9BYJ4 488 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 MYD88Q99836 296 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 PANK2Q9BZ23 570 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 RALGAPBQ86X10 1494 aa20.28■□□□□ 0.84
SLC1A4-201ENST00000234256 SDSP20132 328 aa20.27■□□□□ 0.84
SLC1A4-201ENST00000234256 CCDC70Q6NSX1 233 aa20.27■□□□□ 0.84
SLC1A4-201ENST00000234256 PPP1R42Q7Z4L9 355 aa20.27■□□□□ 0.84
SLC1A4-201ENST00000234256 MPHOSPH8Q99549 860 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms