RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 TAF4BQ92750 862 aa9.37□□□□□ -0.91
GGCX-201ENST00000233838 CWC27Q6UX04 472 aaKnown RBP9.37□□□□□ -0.91
GGCX-201ENST00000233838 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
GGCX-201ENST00000233838 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
GGCX-201ENST00000233838 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
GGCX-201ENST00000233838 SPG7Q9UQ90 795 aa9.37□□□□□ -0.91
GGCX-201ENST00000233838 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 HMGN5P82970 282 aaKnown RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 ERICH4A6NGS2 130 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 JAKMIP1Q96N16 626 aaKnown RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 BCAR3O75815 825 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 CCDC91Q7Z6B0 441 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 CCDC148Q8NFR7 591 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
GGCX-201ENST00000233838 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 INCENPQ9NQS7 918 aa9.36□□□□□ -0.91
GGCX-201ENST00000233838 BTBD11A6QL63 1104 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 PRAM1Q96QH2 718 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 ANAPC15P60006 121 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 SCLT1Q96NL6 688 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 LRP2BPQ9P2M1 347 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 SMTNL1A8MU46 457 aa9.35□□□□□ -0.91
GGCX-201ENST00000233838 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
GGCX-201ENST00000233838 UPF3BQ9BZI7 483 aaKnown RBP9.35□□□□□ -0.91
GGCX-201ENST00000233838 CAMK4Q16566 473 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 NUP62CLQ9H1M0 184 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 GOPCQ9HD26 462 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 BLOC1S2Q6QNY1 142 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 SLC26A8Q96RN1 970 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 CCDC85AQ96PX6 553 aaPredicted RBP9.34□□□□□ -0.91
GGCX-201ENST00000233838 CDK19Q9BWU1 502 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 SRCIN1Q9C0H9 1055 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 GRPEL1Q9HAV7 217 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 CFAP45Q9UL16 551 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 DYDC1Q8WWB3 177 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 WASF1Q92558 559 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 GOLGA6L10A0A0M3HER8 536 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 CASQ1P31415 396 aa9.34□□□□□ -0.91
GGCX-201ENST00000233838 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
GGCX-201ENST00000233838 PNISRQ8TF01 805 aaKnown RBP9.34□□□□□ -0.91
GGCX-201ENST00000233838 SEC63Q9UGP8 760 aaKnown RBP9.33□□□□□ -0.92
GGCX-201ENST00000233838 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
GGCX-201ENST00000233838 PIP4K2BP78356 416 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 TNIP1Q15025 636 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 CCDC178Q5BJE1 867 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 DDX11Q96FC9 970 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 CASTP20810 708 aaKnown RBP9.33□□□□□ -0.92
GGCX-201ENST00000233838 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
GGCX-201ENST00000233838 CHD1LQ86WJ1 897 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 DNAI2Q9GZS0 605 aa9.33□□□□□ -0.92
GGCX-201ENST00000233838 IDH1O75874 414 aaKnown RBP9.32□□□□□ -0.92
GGCX-201ENST00000233838 IMMTQ16891 758 aaKnown RBP9.32□□□□□ -0.92
GGCX-201ENST00000233838 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 PPP4R3AQ6IN85 833 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 TSG101Q99816 390 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 UBA5Q9GZZ9 404 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 DNMBPQ6XZF7 1577 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 CUL7Q14999 1698 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
GGCX-201ENST00000233838 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 GRIN2BQ13224 1484 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 SPA17Q15506 151 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 CFAP100Q494V2 611 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
GGCX-201ENST00000233838 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
GGCX-201ENST00000233838 ARHGAP29Q52LW3 1261 aa9.31□□□□□ -0.92
GGCX-201ENST00000233838 ZSCAN31Q96LW9 406 aaPredicted RBP9.31□□□□□ -0.92
GGCX-201ENST00000233838 BCCIPQ9P287 314 aaKnown RBP eCLIP9.31□□□□□ -0.92
GGCX-201ENST00000233838 CTNNBL1Q8WYA6 563 aaPredicted RBP9.31□□□□□ -0.92
GGCX-201ENST00000233838 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
GGCX-201ENST00000233838 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
GGCX-201ENST00000233838 IL1RAPL2Q9NP60 686 aa9.31□□□□□ -0.92
GGCX-201ENST00000233838 STAMBPO95630 424 aa9.31□□□□□ -0.92
GGCX-201ENST00000233838 NF2P35240 595 aa9.31□□□□□ -0.92
GGCX-201ENST00000233838 CETN2P41208 172 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 GIMAP7Q8NHV1 300 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 TMOD2Q9NZR1 351 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
GGCX-201ENST00000233838 ABCF2Q9UG63 623 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 LIG1P18858 919 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 DNA2P51530 1060 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 AKNAQ7Z591 1439 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 MINDY4BA8MYZ0 360 aa9.3□□□□□ -0.92
GGCX-201ENST00000233838 FKBP15Q5T1M5 1219 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms