RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
SPARC-201ENST00000231061 PAX7P23759 505 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 CYB5RLQ6IPT4 315 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 RETREG2Q8NC44 543 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 ITFG2Q969R8 447 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 CLTCL1P53675 1640 aa10.18□□□□□ -0.78
SPARC-201ENST00000231061 BCAR3O75815 825 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 SYNMO15061 1565 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 PIK3C2GO75747 1445 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 GTF2A1P52655 376 aaPredicted RBP10.17□□□□□ -0.78
SPARC-201ENST00000231061 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 U2AF1L5P0DN76 240 aaPredicted RBP10.17□□□□□ -0.78
SPARC-201ENST00000231061 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.78
SPARC-201ENST00000231061 FAM161AQ3B820 660 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 SPATA32Q96LK8 384 aa10.17□□□□□ -0.78
SPARC-201ENST00000231061 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
SPARC-201ENST00000231061 KDM2BQ8NHM5 1336 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 ZNF521Q96K83 1311 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 IQGAP1P46940 1657 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 HMGN5P82970 282 aaKnown RBP10.16□□□□□ -0.78
SPARC-201ENST00000231061 TRAK1Q9UPV9 953 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 PTPRTO14522 1441 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 SMC3Q9UQE7 1217 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 STK10O94804 968 aaKnown RBP10.16□□□□□ -0.78
SPARC-201ENST00000231061 RPAINQ86UA6 219 aa10.16□□□□□ -0.78
SPARC-201ENST00000231061 PUF60Q9UHX1 559 aaKnown RBP10.16□□□□□ -0.78
SPARC-201ENST00000231061 FANCAO15360 1455 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 MECOMQ03112 1051 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 MORC1Q86VD1 984 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 TTC30AQ86WT1 665 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 SPHKAPQ2M3C7 1700 aa10.15□□□□□ -0.78
SPARC-201ENST00000231061 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.78
SPARC-201ENST00000231061 RRP7AQ9Y3A4 280 aaKnown RBP10.15□□□□□ -0.78
SPARC-201ENST00000231061 CBX1P83916 185 aa10.15□□□□□ -0.79
SPARC-201ENST00000231061 CARD14Q9BXL6 1004 aa10.15□□□□□ -0.79
SPARC-201ENST00000231061 SENP3Q9H4L4 574 aaPredicted RBP10.15□□□□□ -0.79
SPARC-201ENST00000231061 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.79
SPARC-201ENST00000231061 ATP7AQ04656 1500 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
SPARC-201ENST00000231061 UHRF1BP1LA0JNW5 1464 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 ADGRL1O94910 1474 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 CREB3O43889 395 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 DMRT2Q9Y5R5 561 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 GOLGA6L3A6NEY3 463 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 NAT2P11245 290 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 GGT6Q6P531 493 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 TMX1Q9H3N1 280 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 NUB1Q9Y5A7 615 aa10.14□□□□□ -0.79
SPARC-201ENST00000231061 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
SPARC-201ENST00000231061 HDGFL1Q5TGJ6 251 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 BSDC1Q9NW68 430 aaPredicted RBP10.13□□□□□ -0.79
SPARC-201ENST00000231061 NPC1L1Q9UHC9 1359 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 CEP152O94986 1710 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 LRCH2Q5VUJ6 765 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
SPARC-201ENST00000231061 NCAPGQ9BPX3 1015 aa10.13□□□□□ -0.79
SPARC-201ENST00000231061 KDM5AP29375 1690 aaKnown RBP10.12□□□□□ -0.79
SPARC-201ENST00000231061 RIPK4P57078 832 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 TET3O43151 1660 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 ERVK-7P63135 1459 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 ECEL1O95672 775 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 CLUAP1Q96AJ1 413 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 SUDS3Q9H7L9 328 aaPredicted RBP10.12□□□□□ -0.79
SPARC-201ENST00000231061 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 SMAPO00193 183 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 PANK1Q8TE04 598 aa10.12□□□□□ -0.79
SPARC-201ENST00000231061 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
SPARC-201ENST00000231061 NUTM2DQ5VT03 806 aaPredicted RBP10.11□□□□□ -0.79
SPARC-201ENST00000231061 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 ANAPC4Q9UJX5 808 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 NSD3Q9BZ95 1437 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 E2F5Q15329 346 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 NOS1P29475 1434 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 TERF1P54274 439 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 GIMAP6Q6P9H5 292 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 MAF1Q9H063 256 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 RMI1Q9H9A7 625 aa10.11□□□□□ -0.79
SPARC-201ENST00000231061 IQSEC3Q9UPP2 1182 aaPredicted RBP10.11□□□□□ -0.79
SPARC-201ENST00000231061 CAND2O75155 1236 aa10.1□□□□□ -0.79
SPARC-201ENST00000231061 TPM3P06753 285 aa10.1□□□□□ -0.79
SPARC-201ENST00000231061 WDR78Q5VTH9 848 aa10.1□□□□□ -0.79
SPARC-201ENST00000231061 MTERF4Q7Z6M4 381 aaKnown RBP10.1□□□□□ -0.79
SPARC-201ENST00000231061 TRMT2AQ8IZ69 625 aaKnown RBP10.1□□□□□ -0.79
SPARC-201ENST00000231061 MYOM1P52179 1685 aa10.1□□□□□ -0.79
SPARC-201ENST00000231061 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
SPARC-201ENST00000231061 ESPNB1AK53 854 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms