RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 DDX58O95786 925 aaKnown RBP17.71■□□□□ 0.43
PTK7-201ENST00000230418 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
PTK7-201ENST00000230418 TOM1L2Q6ZVM7 507 aa17.71■□□□□ 0.43
PTK7-201ENST00000230418 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
PTK7-201ENST00000230418 GPATCH3Q96I76 525 aa17.71■□□□□ 0.42
PTK7-201ENST00000230418 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.42
PTK7-201ENST00000230418 NPHP1O15259 732 aa17.7■□□□□ 0.42
PTK7-201ENST00000230418 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
PTK7-201ENST00000230418 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
PTK7-201ENST00000230418 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
PTK7-201ENST00000230418 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.422e-11■□□□□ 8.4
PTK7-201ENST00000230418 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
PTK7-201ENST00000230418 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
PTK7-201ENST00000230418 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
PTK7-201ENST00000230418 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
PTK7-201ENST00000230418 INSRP06213 1382 aa17.69■□□□□ 0.42
PTK7-201ENST00000230418 JARID2Q92833 1246 aaPredicted RBP17.68■□□□□ 0.42
PTK7-201ENST00000230418 TTC21AQ8NDW8 1320 aa17.68■□□□□ 0.42
PTK7-201ENST00000230418 HDAC1Q13547 482 aaPredicted RBP17.68■□□□□ 0.42
PTK7-201ENST00000230418 PTCD1O75127 700 aaKnown RBP17.68■□□□□ 0.42
PTK7-201ENST00000230418 HOXC9P31274 260 aa17.68■□□□□ 0.42
PTK7-201ENST00000230418 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
PTK7-201ENST00000230418 NEK4P51957 841 aa17.67■□□□□ 0.42
PTK7-201ENST00000230418 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
PTK7-201ENST00000230418 GLI2P10070 1586 aa17.67■□□□□ 0.42
PTK7-201ENST00000230418 FLT4P35916 1363 aa17.67■□□□□ 0.42
PTK7-201ENST00000230418 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 DDX49Q9Y6V7 483 aaKnown RBP17.66■□□□□ 0.42
PTK7-201ENST00000230418 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
PTK7-201ENST00000230418 NUCB1Q02818 461 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 HDAC5Q9UQL6 1122 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 A2ML1A8K2U0 1454 aa17.66■□□□□ 0.42
PTK7-201ENST00000230418 CLASRPQ8N2M8 674 aaKnown RBP17.65■□□□□ 0.42
PTK7-201ENST00000230418 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
PTK7-201ENST00000230418 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.42
PTK7-201ENST00000230418 CABP4P57796 275 aa17.64■□□□□ 0.42
PTK7-201ENST00000230418 OTUD7AQ8TE49 926 aaPredicted RBP17.64■□□□□ 0.42
PTK7-201ENST00000230418 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.42
PTK7-201ENST00000230418 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.42
PTK7-201ENST00000230418 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
PTK7-201ENST00000230418 GCP02774 474 aa17.64■□□□□ 0.41
PTK7-201ENST00000230418 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
PTK7-201ENST00000230418 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
PTK7-201ENST00000230418 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
PTK7-201ENST00000230418 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
PTK7-201ENST00000230418 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
PTK7-201ENST00000230418 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
PTK7-201ENST00000230418 BRPF3Q9ULD4 1205 aa17.63■□□□□ 0.41
PTK7-201ENST00000230418 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
PTK7-201ENST00000230418 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
PTK7-201ENST00000230418 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
PTK7-201ENST00000230418 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
PTK7-201ENST00000230418 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
PTK7-201ENST00000230418 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
PTK7-201ENST00000230418 UPF3BQ9BZI7 483 aaKnown RBP17.61■□□□□ 0.41
PTK7-201ENST00000230418 CHL1O00533 1208 aa17.6■□□□□ 0.41
PTK7-201ENST00000230418 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
PTK7-201ENST00000230418 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
PTK7-201ENST00000230418 QRICH2Q9H0J4 1663 aa17.6■□□□□ 0.41
PTK7-201ENST00000230418 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
PTK7-201ENST00000230418 PTPRCP08575 1304 aa17.6■□□□□ 0.41
PTK7-201ENST00000230418 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
PTK7-201ENST00000230418 SPG7Q9UQ90 795 aa17.59■□□□□ 0.41
PTK7-201ENST00000230418 ALKQ9UM73 1620 aa17.59■□□□□ 0.41
PTK7-201ENST00000230418 ERC2O15083 957 aa17.59■□□□□ 0.41
PTK7-201ENST00000230418 LMTK2Q8IWU2 1503 aa17.59■□□□□ 0.41
PTK7-201ENST00000230418 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
PTK7-201ENST00000230418 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.41
PTK7-201ENST00000230418 DDX11L8A8MPP1 907 aa17.58■□□□□ 0.41
PTK7-201ENST00000230418 BMP2KLQ5H9B9 411 aa17.58■□□□□ 0.41
PTK7-201ENST00000230418 IL27Q8NEV9 243 aa17.58■□□□□ 0.41
PTK7-201ENST00000230418 MX1P20591 662 aa17.58■□□□□ 0.4
PTK7-201ENST00000230418 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.4
PTK7-201ENST00000230418 LARP6Q9BRS8 491 aaKnown RBP17.58■□□□□ 0.4
PTK7-201ENST00000230418 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
PTK7-201ENST00000230418 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
PTK7-201ENST00000230418 TRAK2O60296 914 aa17.57■□□□□ 0.4
PTK7-201ENST00000230418 DNAJC2Q99543 621 aaKnown RBP17.57■□□□□ 0.4
PTK7-201ENST00000230418 MAP3K2Q9Y2U5 619 aa17.57■□□□□ 0.4
PTK7-201ENST00000230418 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
PTK7-201ENST00000230418 CEP85Q6P2H3 762 aa17.57■□□□□ 0.4
PTK7-201ENST00000230418 AACSQ86V21 672 aa17.57■□□□□ 0.4
PTK7-201ENST00000230418 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 K7ELQ4 463 aaPredicted RBP17.56■□□□□ 0.4
PTK7-201ENST00000230418 KCNQ3O43525 872 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 SDSP20132 328 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 FRMPD1Q5SYB0 1578 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 MSH6P52701 1360 aa17.56■□□□□ 0.4
PTK7-201ENST00000230418 AMOTQ4VCS5 1084 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 MYD88Q99836 296 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
PTK7-201ENST00000230418 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
PTK7-201ENST00000230418 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms