RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
EFNB3-201ENST00000226091 MED14O60244 1454 aa20.5■□□□□ 0.87
EFNB3-201ENST00000226091 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
EFNB3-201ENST00000226091 ZNF853P0CG23 659 aa20.49■□□□□ 0.87
EFNB3-201ENST00000226091 PLEKHM2Q8IWE5 1019 aa20.49■□□□□ 0.87
EFNB3-201ENST00000226091 STK31Q9BXU1 1019 aa20.49■□□□□ 0.87
EFNB3-201ENST00000226091 RICTORQ6R327 1708 aa20.49■□□□□ 0.87
EFNB3-201ENST00000226091 KCNA6P17658 529 aa20.49■□□□□ 0.87
EFNB3-201ENST00000226091 MSH6P52701 1360 aa20.48■□□□□ 0.87
EFNB3-201ENST00000226091 SSFA2P28290 1259 aa20.48■□□□□ 0.87
EFNB3-201ENST00000226091 GAS2L2Q8NHY3 880 aa20.48■□□□□ 0.87
EFNB3-201ENST00000226091 TNPO1Q92973 898 aaKnown RBP20.48■□□□□ 0.87
EFNB3-201ENST00000226091 LARP6Q9BRS8 491 aaKnown RBP20.48■□□□□ 0.87
EFNB3-201ENST00000226091 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
EFNB3-201ENST00000226091 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
EFNB3-201ENST00000226091 GOLGA6L3A6NEY3 463 aa20.46■□□□□ 0.87
EFNB3-201ENST00000226091 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
EFNB3-201ENST00000226091 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
EFNB3-201ENST00000226091 CDC45O75419 566 aa20.45■□□□□ 0.86
EFNB3-201ENST00000226091 SDSP20132 328 aa20.45■□□□□ 0.86
EFNB3-201ENST00000226091 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
EFNB3-201ENST00000226091 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
EFNB3-201ENST00000226091 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
EFNB3-201ENST00000226091 RBM25P49756 843 aaKnown RBP20.44■□□□□ 0.86
EFNB3-201ENST00000226091 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
EFNB3-201ENST00000226091 PHAXQ9H814 394 aaKnown RBP20.44■□□□□ 0.86
EFNB3-201ENST00000226091 PKP1Q13835 747 aa20.44■□□□□ 0.86
EFNB3-201ENST00000226091 ABCC4O15439 1325 aa20.44■□□□□ 0.86
EFNB3-201ENST00000226091 CHL1O00533 1208 aa20.44■□□□□ 0.86
EFNB3-201ENST00000226091 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
EFNB3-201ENST00000226091 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
EFNB3-201ENST00000226091 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
EFNB3-201ENST00000226091 NUTM1Q86Y26 1132 aa20.42■□□□□ 0.86
EFNB3-201ENST00000226091 KIF2CQ99661 725 aa20.42■□□□□ 0.86
EFNB3-201ENST00000226091 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
EFNB3-201ENST00000226091 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
EFNB3-201ENST00000226091 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
EFNB3-201ENST00000226091 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
EFNB3-201ENST00000226091 BRPF1P55201 1214 aaPredicted RBP20.4■□□□□ 0.86
EFNB3-201ENST00000226091 DDX54Q8TDD1 881 aaKnown RBP20.4■□□□□ 0.86
EFNB3-201ENST00000226091 ARHGAP45Q92619 1136 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 LRRFIP2Q9Y608 721 aaKnown RBP20.4■□□□□ 0.86
EFNB3-201ENST00000226091 KIF20BQ96Q89 1820 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 KCNQ3O43525 872 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 ZGPATQ8N5A5 531 aaKnown RBP20.4■□□□□ 0.86
EFNB3-201ENST00000226091 DCTPP1Q9H773 170 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 FSD2A1L4K1 749 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 MCTP1Q6DN14 999 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 ANO2Q9NQ90 1003 aa20.4■□□□□ 0.86
EFNB3-201ENST00000226091 LGR6Q9HBX8 967 aa20.39■□□□□ 0.85
EFNB3-201ENST00000226091 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
EFNB3-201ENST00000226091 K7ELQ4 463 aaPredicted RBP20.39■□□□□ 0.85
EFNB3-201ENST00000226091 PSME1Q06323 249 aa20.39■□□□□ 0.85
EFNB3-201ENST00000226091 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
EFNB3-201ENST00000226091 TTC22Q5TAA0 569 aa20.39■□□□□ 0.85
EFNB3-201ENST00000226091 UPF3BQ9BZI7 483 aaKnown RBP20.39■□□□□ 0.85
EFNB3-201ENST00000226091 DDIT3P35638 169 aa20.38■□□□□ 0.85
EFNB3-201ENST00000226091 FLIIQ13045 1269 aa20.38■□□□□ 0.85
EFNB3-201ENST00000226091 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
EFNB3-201ENST00000226091 HDGFL1Q5TGJ6 251 aa20.38■□□□□ 0.85
EFNB3-201ENST00000226091 SNX21Q969T3 373 aa20.37■□□□□ 0.85
EFNB3-201ENST00000226091 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
EFNB3-201ENST00000226091 OS9Q13438 667 aaPredicted RBP20.37■□□□□ 0.85
EFNB3-201ENST00000226091 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
EFNB3-201ENST00000226091 ATP7BP35670 1465 aa20.36■□□□□ 0.85
EFNB3-201ENST00000226091 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
EFNB3-201ENST00000226091 NEK4P51957 841 aa20.36■□□□□ 0.85
EFNB3-201ENST00000226091 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
EFNB3-201ENST00000226091 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
EFNB3-201ENST00000226091 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
EFNB3-201ENST00000226091 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
EFNB3-201ENST00000226091 CASC1Q6TDU7 716 aa20.35■□□□□ 0.85
EFNB3-201ENST00000226091 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
EFNB3-201ENST00000226091 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
EFNB3-201ENST00000226091 SURF6O75683 361 aaKnown RBP20.34■□□□□ 0.85
EFNB3-201ENST00000226091 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
EFNB3-201ENST00000226091 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
EFNB3-201ENST00000226091 GNAI2P04899 355 aa20.34■□□□□ 0.85
EFNB3-201ENST00000226091 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
EFNB3-201ENST00000226091 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
EFNB3-201ENST00000226091 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.85
EFNB3-201ENST00000226091 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.85
EFNB3-201ENST00000226091 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.85
EFNB3-201ENST00000226091 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.84
EFNB3-201ENST00000226091 HMMRO75330 724 aa20.33■□□□□ 0.84
EFNB3-201ENST00000226091 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.84
EFNB3-201ENST00000226091 RTL1A6NKG5 1358 aa20.33■□□□□ 0.84
EFNB3-201ENST00000226091 AK9Q5TCS8 1911 aa20.33■□□□□ 0.84
EFNB3-201ENST00000226091 HOXC9P31274 260 aa20.32■□□□□ 0.84
EFNB3-201ENST00000226091 UNC5CLQ8IV45 518 aa20.32■□□□□ 0.84
EFNB3-201ENST00000226091 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
EFNB3-201ENST00000226091 RPAP2Q8IXW5 612 aaPredicted RBP20.32■□□□□ 0.84
EFNB3-201ENST00000226091 GBP4Q96PP9 640 aa20.32■□□□□ 0.84
EFNB3-201ENST00000226091 GAS2L3Q86XJ1 694 aa20.31■□□□□ 0.84
EFNB3-201ENST00000226091 PLEKHG3A1L390 1219 aa20.31■□□□□ 0.84
EFNB3-201ENST00000226091 MPNDQ8N594 471 aa20.31■□□□□ 0.84
EFNB3-201ENST00000226091 ORAI2Q96SN7 254 aa20.31■□□□□ 0.84
EFNB3-201ENST00000226091 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
EFNB3-201ENST00000226091 UBTFL1P0CB47 393 aaPredicted RBP20.3■□□□□ 0.84
EFNB3-201ENST00000226091 PDE1AP54750 535 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms