RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
PCOLCE-201ENST00000223061 COL3A1P02461 1466 aaPredicted RBP19.76■□□□□ 0.75
PCOLCE-201ENST00000223061 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
PCOLCE-201ENST00000223061 SF3B2Q13435 895 aaKnown RBP19.75■□□□□ 0.75
PCOLCE-201ENST00000223061 CCDC125Q86Z20 511 aa19.74■□□□□ 0.75
PCOLCE-201ENST00000223061 HMOX1P09601 288 aa19.73■□□□□ 0.75
PCOLCE-201ENST00000223061 SPG7Q9UQ90 795 aa19.72■□□□□ 0.75
PCOLCE-201ENST00000223061 PCDH11XQ9BZA7 1347 aa19.72■□□□□ 0.75
PCOLCE-201ENST00000223061 PCDH11YQ9BZA8 1340 aa19.72■□□□□ 0.75
PCOLCE-201ENST00000223061 RGPD1P0DJD0 1748 aa19.71■□□□□ 0.75
PCOLCE-201ENST00000223061 MYBBP1AQ9BQG0 1328 aaKnown RBP19.71■□□□□ 0.75
PCOLCE-201ENST00000223061 ACSBG1Q96GR2 724 aa19.71■□□□□ 0.75
PCOLCE-201ENST00000223061 PRKRIP1Q9H875 184 aaPredicted RBP19.71■□□□□ 0.75
PCOLCE-201ENST00000223061 KDRP35968 1356 aa19.7■□□□□ 0.74
PCOLCE-201ENST00000223061 BCL9O00512 1426 aa19.7■□□□□ 0.74
PCOLCE-201ENST00000223061 DEFB132Q7Z7B7 95 aa19.7■□□□□ 0.74
PCOLCE-201ENST00000223061 CYP27B1O15528 508 aa19.69■□□□□ 0.74
PCOLCE-201ENST00000223061 PTF1AQ7RTS3 328 aa19.69■□□□□ 0.74
PCOLCE-201ENST00000223061 NUDCQ9Y266 331 aa19.69■□□□□ 0.74
PCOLCE-201ENST00000223061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCOLCE-201ENST00000223061 KCNQ2O43526 872 aa19.68■□□□□ 0.74
PCOLCE-201ENST00000223061 APBA3O96018 575 aa19.68■□□□□ 0.74
PCOLCE-201ENST00000223061 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
PCOLCE-201ENST00000223061 SHANK3Q9BYB0 1731 aa19.67■□□□□ 0.74
PCOLCE-201ENST00000223061 BAG6P46379 1132 aa19.67■□□□□ 0.74
PCOLCE-201ENST00000223061 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
PCOLCE-201ENST00000223061 U2AF1L5P0DN76 240 aaPredicted RBP19.66■□□□□ 0.74
PCOLCE-201ENST00000223061 U2AF1Q01081 240 aaKnown RBP eCLIP19.66■□□□□ 0.74
PCOLCE-201ENST00000223061 PKD1L3Q7Z443 1732 aa19.66■□□□□ 0.74
PCOLCE-201ENST00000223061 AMOTQ4VCS5 1084 aa19.65■□□□□ 0.74
PCOLCE-201ENST00000223061 SYTL4Q96C24 671 aaPredicted RBP19.65■□□□□ 0.74
PCOLCE-201ENST00000223061 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
PCOLCE-201ENST00000223061 ZNF530Q6P9A1 599 aaPredicted RBP19.65■□□□□ 0.74
PCOLCE-201ENST00000223061 PLEKHG2Q9H7P9 1386 aa19.64■□□□□ 0.74
PCOLCE-201ENST00000223061 PHKG2P15735 406 aa19.64■□□□□ 0.73
PCOLCE-201ENST00000223061 IFNL2Q8IZJ0 200 aa19.64■□□□□ 0.73
PCOLCE-201ENST00000223061 TNS1Q9HBL0 1735 aaKnown RBP19.63■□□□□ 0.73
PCOLCE-201ENST00000223061 PRIM1P49642 420 aaKnown RBP19.63■□□□□ 0.73
PCOLCE-201ENST00000223061 ANP32CO43423 234 aa19.62■□□□□ 0.73
PCOLCE-201ENST00000223061 PRKAR2BP31323 418 aa19.61■□□□□ 0.73
PCOLCE-201ENST00000223061 C1orf141Q5JVX7 400 aa19.61■□□□□ 0.73
PCOLCE-201ENST00000223061 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
PCOLCE-201ENST00000223061 SBF2Q86WG5 1849 aa19.61■□□□□ 0.73
PCOLCE-201ENST00000223061 NKX1-1Q15270 411 aaPredicted RBP19.6■□□□□ 0.73
PCOLCE-201ENST00000223061 NHSQ6T4R5 1651 aa19.6■□□□□ 0.73
PCOLCE-201ENST00000223061 EZH2Q15910 746 aaKnown RBP19.59■□□□□ 0.73
PCOLCE-201ENST00000223061 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
PCOLCE-201ENST00000223061 CAMKK2Q96RR4 588 aa19.59■□□□□ 0.73
PCOLCE-201ENST00000223061 DOT1LQ8TEK3 1739 aa19.59■□□□□ 0.73
PCOLCE-201ENST00000223061 FCHSD2O94868 740 aa19.58■□□□□ 0.72
PCOLCE-201ENST00000223061 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
PCOLCE-201ENST00000223061 PHACTR3Q96KR7 559 aa19.57■□□□□ 0.72
PCOLCE-201ENST00000223061 HSP90AB1P08238 724 aaKnown RBP19.56■□□□□ 0.72
PCOLCE-201ENST00000223061 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
PCOLCE-201ENST00000223061 PLSCR1O15162 318 aa19.55■□□□□ 0.72
PCOLCE-201ENST00000223061 AKAP4Q5JQC9 854 aa19.55■□□□□ 0.72
PCOLCE-201ENST00000223061 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
PCOLCE-201ENST00000223061 KDM6AO15550 1401 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-201ENST00000223061 TOGARAM1Q9Y4F4 1720 aa19.54■□□□□ 0.72
PCOLCE-201ENST00000223061 WDR43Q15061 677 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCOLCE-201ENST00000223061 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
PCOLCE-201ENST00000223061 PIGBQ92521 554 aa19.53■□□□□ 0.72
PCOLCE-201ENST00000223061 CCDC184Q52MB2 194 aa19.52■□□□□ 0.72
PCOLCE-201ENST00000223061 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.72
PCOLCE-201ENST00000223061 BTAF1O14981 1849 aa19.52■□□□□ 0.72
PCOLCE-201ENST00000223061 NEFMP07197 916 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 CABP4P57796 275 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 PROM2Q8N271 834 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
PCOLCE-201ENST00000223061 MAP3K5Q99683 1374 aa19.5■□□□□ 0.71
PCOLCE-201ENST00000223061 PLEKHF1Q96S99 279 aa19.5■□□□□ 0.71
PCOLCE-201ENST00000223061 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
PCOLCE-201ENST00000223061 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-201ENST00000223061 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
PCOLCE-201ENST00000223061 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
PCOLCE-201ENST00000223061 ADAMTS8Q9UP79 889 aa19.48■□□□□ 0.71
PCOLCE-201ENST00000223061 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
PCOLCE-201ENST00000223061 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
PCOLCE-201ENST00000223061 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
PCOLCE-201ENST00000223061 ASAP1Q9ULH1 1129 aa19.47■□□□□ 0.71
PCOLCE-201ENST00000223061 PALLDQ8WX93 1383 aa19.46■□□□□ 0.71
PCOLCE-201ENST00000223061 KCNQ4P56696 695 aa19.46■□□□□ 0.71
PCOLCE-201ENST00000223061 RGPD3A6NKT7 1758 aaPredicted RBP19.46■□□□□ 0.71
PCOLCE-201ENST00000223061 RGPD4Q7Z3J3 1758 aa19.46■□□□□ 0.71
PCOLCE-201ENST00000223061 SMARCC1Q92922 1105 aaPredicted RBP19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 ITGB4P16144 1822 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 RREB1Q92766 1687 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 LRRC4BQ9NT99 713 aa19.45■□□□□ 0.7
PCOLCE-201ENST00000223061 RTF1Q92541 710 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-201ENST00000223061 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
PCOLCE-201ENST00000223061 NUP188Q5SRE5 1749 aa19.43■□□□□ 0.7
PCOLCE-201ENST00000223061 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
PCOLCE-201ENST00000223061 SLC27A3Q5K4L6 730 aa19.43■□□□□ 0.7
PCOLCE-201ENST00000223061 NBPF14Q5TI25 921 aa19.43■□□□□ 0.7
PCOLCE-201ENST00000223061 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms