RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
SNU13-201ENST00000215956 COL24A1Q17RW2 1714 aa16.49■□□□□ 0.23
SNU13-201ENST00000215956 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
SNU13-201ENST00000215956 TUBGCP6Q96RT7 1819 aa16.48■□□□□ 0.23
SNU13-201ENST00000215956 ERBB3P21860 1342 aa16.47■□□□□ 0.23
SNU13-201ENST00000215956 GPR162Q16538 588 aa16.47■□□□□ 0.23
SNU13-201ENST00000215956 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
SNU13-201ENST00000215956 IL2RBP14784 551 aa16.46■□□□□ 0.23
SNU13-201ENST00000215956 LRRC4BQ9NT99 713 aa16.45■□□□□ 0.22
SNU13-201ENST00000215956 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
SNU13-201ENST00000215956 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
SNU13-201ENST00000215956 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
SNU13-201ENST00000215956 USP31Q70CQ4 1352 aa16.44■□□□□ 0.22
SNU13-201ENST00000215956 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
SNU13-201ENST00000215956 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
SNU13-201ENST00000215956 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
SNU13-201ENST00000215956 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
SNU13-201ENST00000215956 POLD1P28340 1107 aa16.42■□□□□ 0.22
SNU13-201ENST00000215956 FAM208AQ9UK61 1670 aaKnown RBP16.41■□□□□ 0.22
SNU13-201ENST00000215956 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
SNU13-201ENST00000215956 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
SNU13-201ENST00000215956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNU13-201ENST00000215956 LY75O60449 1722 aa16.4■□□□□ 0.22
SNU13-201ENST00000215956 DOT1LQ8TEK3 1739 aa16.4■□□□□ 0.22
SNU13-201ENST00000215956 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
SNU13-201ENST00000215956 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
SNU13-201ENST00000215956 NME9Q86XW9 330 aa16.39■□□□□ 0.21
SNU13-201ENST00000215956 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
SNU13-201ENST00000215956 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
SNU13-201ENST00000215956 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
SNU13-201ENST00000215956 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
SNU13-201ENST00000215956 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
SNU13-201ENST00000215956 CNGB1Q14028 1251 aaPredicted RBP16.36■□□□□ 0.21
SNU13-201ENST00000215956 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
SNU13-201ENST00000215956 DDX54Q8TDD1 881 aaKnown RBP16.36■□□□□ 0.21
SNU13-201ENST00000215956 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
SNU13-201ENST00000215956 KCNQ4P56696 695 aa16.34■□□□□ 0.21
SNU13-201ENST00000215956 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNU13-201ENST00000215956 NSD2O96028 1365 aa16.34■□□□□ 0.21
SNU13-201ENST00000215956 INSRP06213 1382 aa16.34■□□□□ 0.21
SNU13-201ENST00000215956 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
SNU13-201ENST00000215956 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
SNU13-201ENST00000215956 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
SNU13-201ENST00000215956 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
SNU13-201ENST00000215956 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
SNU13-201ENST00000215956 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
SNU13-201ENST00000215956 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.26e-12■■■□□ 15.6
SNU13-201ENST00000215956 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
SNU13-201ENST00000215956 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
SNU13-201ENST00000215956 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
SNU13-201ENST00000215956 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
SNU13-201ENST00000215956 IP6K1Q92551 441 aa16.3■□□□□ 0.2
SNU13-201ENST00000215956 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
SNU13-201ENST00000215956 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
SNU13-201ENST00000215956 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
SNU13-201ENST00000215956 ATP10DQ9P241 1426 aa16.3■□□□□ 0.2
SNU13-201ENST00000215956 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
SNU13-201ENST00000215956 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
SNU13-201ENST00000215956 C5P01031 1676 aa16.29■□□□□ 0.2
SNU13-201ENST00000215956 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
SNU13-201ENST00000215956 MSH5O43196 834 aa16.29■□□□□ 0.2
SNU13-201ENST00000215956 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
SNU13-201ENST00000215956 PPP2R1AP30153 589 aa16.28■□□□□ 0.2
SNU13-201ENST00000215956 MEGF6O75095 1541 aa16.28■□□□□ 0.2
SNU13-201ENST00000215956 TAF1LQ8IZX4 1826 aa16.27■□□□□ 0.2
SNU13-201ENST00000215956 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
SNU13-201ENST00000215956 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
SNU13-201ENST00000215956 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
SNU13-201ENST00000215956 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
SNU13-201ENST00000215956 HOXC9P31274 260 aa16.24■□□□□ 0.19
SNU13-201ENST00000215956 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
SNU13-201ENST00000215956 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
SNU13-201ENST00000215956 ADCY9O60503 1353 aa16.24■□□□□ 0.19
SNU13-201ENST00000215956 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
SNU13-201ENST00000215956 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNU13-201ENST00000215956 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
SNU13-201ENST00000215956 AMPHP49418 695 aa16.22■□□□□ 0.19
SNU13-201ENST00000215956 HSPA6P17066 643 aa16.21■□□□□ 0.19
SNU13-201ENST00000215956 COG3Q96JB2 828 aa16.21■□□□□ 0.19
SNU13-201ENST00000215956 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
SNU13-201ENST00000215956 UBR3Q6ZT12 1888 aa16.2■□□□□ 0.18
SNU13-201ENST00000215956 C4BP0C0L5 1744 aa16.2■□□□□ 0.18
SNU13-201ENST00000215956 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
SNU13-201ENST00000215956 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
SNU13-201ENST00000215956 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
SNU13-201ENST00000215956 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
SNU13-201ENST00000215956 ITGB4P16144 1822 aa16.19■□□□□ 0.18
SNU13-201ENST00000215956 FBLN1P23142 703 aa16.19■□□□□ 0.18
SNU13-201ENST00000215956 PALLDQ8WX93 1383 aa16.18■□□□□ 0.18
SNU13-201ENST00000215956 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
SNU13-201ENST00000215956 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
SNU13-201ENST00000215956 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
SNU13-201ENST00000215956 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
SNU13-201ENST00000215956 RAPGEF4Q8WZA2 1011 aa16.17■□□□□ 0.18
SNU13-201ENST00000215956 SMG6Q86US8 1419 aaKnown RBP16.17■□□□□ 0.18
SNU13-201ENST00000215956 IGSF1Q8N6C5 1336 aa16.16■□□□□ 0.18
SNU13-201ENST00000215956 PCDH11XQ9BZA7 1347 aa16.16■□□□□ 0.18
SNU13-201ENST00000215956 PCDH11YQ9BZA8 1340 aa16.16■□□□□ 0.18
SNU13-201ENST00000215956 NEFLP07196 543 aa16.16■□□□□ 0.18
SNU13-201ENST00000215956 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms