RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
SYPL1-201ENST00000011473 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
SYPL1-201ENST00000011473 RGPD1P0DJD0 1748 aa16.15■□□□□ 0.18
SYPL1-201ENST00000011473 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
SYPL1-201ENST00000011473 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
SYPL1-201ENST00000011473 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
SYPL1-201ENST00000011473 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYPL1-201ENST00000011473 KDRP35968 1356 aa16.13■□□□□ 0.17
SYPL1-201ENST00000011473 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
SYPL1-201ENST00000011473 CYP27B1O15528 508 aa16.1■□□□□ 0.17
SYPL1-201ENST00000011473 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
SYPL1-201ENST00000011473 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
SYPL1-201ENST00000011473 PTF1AQ7RTS3 328 aa16.1■□□□□ 0.17
SYPL1-201ENST00000011473 TRIM37O94972 964 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
SYPL1-201ENST00000011473 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 PCDH11XQ9BZA7 1347 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 PCDH11YQ9BZA8 1340 aa16.09■□□□□ 0.17
SYPL1-201ENST00000011473 SOCS7O14512 581 aa16.08■□□□□ 0.16
SYPL1-201ENST00000011473 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.16
SYPL1-201ENST00000011473 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
SYPL1-201ENST00000011473 KCNQ2O43526 872 aa16.07■□□□□ 0.16
SYPL1-201ENST00000011473 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
SYPL1-201ENST00000011473 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
SYPL1-201ENST00000011473 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
SYPL1-201ENST00000011473 PHKG2P15735 406 aa16.06■□□□□ 0.16
SYPL1-201ENST00000011473 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
SYPL1-201ENST00000011473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
SYPL1-201ENST00000011473 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
SYPL1-201ENST00000011473 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
SYPL1-201ENST00000011473 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
SYPL1-201ENST00000011473 FCHSD2O94868 740 aa16.04■□□□□ 0.16
SYPL1-201ENST00000011473 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
SYPL1-201ENST00000011473 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
SYPL1-201ENST00000011473 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
SYPL1-201ENST00000011473 PRIM1P49642 420 aaKnown RBP16.03■□□□□ 0.16
SYPL1-201ENST00000011473 DEFB132Q7Z7B7 95 aa16.03■□□□□ 0.16
SYPL1-201ENST00000011473 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
SYPL1-201ENST00000011473 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
SYPL1-201ENST00000011473 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
SYPL1-201ENST00000011473 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
SYPL1-201ENST00000011473 BCL9O00512 1426 aa16.01■□□□□ 0.15
SYPL1-201ENST00000011473 APBA3O96018 575 aa16■□□□□ 0.15
SYPL1-201ENST00000011473 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
SYPL1-201ENST00000011473 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
SYPL1-201ENST00000011473 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
SYPL1-201ENST00000011473 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
SYPL1-201ENST00000011473 MIER1Q8N108 512 aa16■□□□□ 0.15
SYPL1-201ENST00000011473 BCL11BQ9C0K0 894 aaPredicted RBP16■□□□□ 0.15
SYPL1-201ENST00000011473 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
SYPL1-201ENST00000011473 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
SYPL1-201ENST00000011473 EN1Q05925 392 aaPredicted RBP15.98■□□□□ 0.15
SYPL1-201ENST00000011473 GAS2L2Q8NHY3 880 aa15.98■□□□□ 0.15
SYPL1-201ENST00000011473 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
SYPL1-201ENST00000011473 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
SYPL1-201ENST00000011473 DOT1LQ8TEK3 1739 aa15.98■□□□□ 0.15
SYPL1-201ENST00000011473 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
SYPL1-201ENST00000011473 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
SYPL1-201ENST00000011473 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
SYPL1-201ENST00000011473 DCAF5Q96JK2 942 aa15.97■□□□□ 0.15
SYPL1-201ENST00000011473 NEFMP07197 916 aa15.97■□□□□ 0.15
SYPL1-201ENST00000011473 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
SYPL1-201ENST00000011473 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
SYPL1-201ENST00000011473 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
SYPL1-201ENST00000011473 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
SYPL1-201ENST00000011473 MAP3K5Q99683 1374 aa15.96■□□□□ 0.14
SYPL1-201ENST00000011473 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
SYPL1-201ENST00000011473 BAG6P46379 1132 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 NEUROD2Q15784 382 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 PIGBQ92521 554 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 EZH2Q15910 746 aaKnown RBP15.95■□□□□ 0.14
SYPL1-201ENST00000011473 MCM10Q7L590 875 aa15.95■□□□□ 0.14
SYPL1-201ENST00000011473 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
SYPL1-201ENST00000011473 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
SYPL1-201ENST00000011473 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
SYPL1-201ENST00000011473 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
SYPL1-201ENST00000011473 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
SYPL1-201ENST00000011473 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
SYPL1-201ENST00000011473 CABP4P57796 275 aa15.93■□□□□ 0.14
SYPL1-201ENST00000011473 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
SYPL1-201ENST00000011473 KCNQ4P56696 695 aa15.92■□□□□ 0.14
SYPL1-201ENST00000011473 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
SYPL1-201ENST00000011473 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
SYPL1-201ENST00000011473 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
SYPL1-201ENST00000011473 THUMPD2Q9BTF0 503 aaKnown RBP15.92■□□□□ 0.14
SYPL1-201ENST00000011473 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
SYPL1-201ENST00000011473 APAF1O14727 1248 aa15.91■□□□□ 0.14
SYPL1-201ENST00000011473 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
SYPL1-201ENST00000011473 RIPK4P57078 832 aa15.91■□□□□ 0.14
SYPL1-201ENST00000011473 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
SYPL1-201ENST00000011473 BTAF1O14981 1849 aa15.91■□□□□ 0.14
SYPL1-201ENST00000011473 PROM2Q8N271 834 aa15.91■□□□□ 0.14
SYPL1-201ENST00000011473 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
SYPL1-201ENST00000011473 PLSCR1O15162 318 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms