RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Gemin5Q8BX17 1502 aaKnown RBP16.17■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Mrps27Q8BK72 415 aaKnown RBP16.17■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Dmrtc1Q9D9R7 182 aa16.17■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Cps1Q8C196 1500 aa16.16■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Ccdc146E9Q9F7 977 aa16.16■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Clcn1Q64347 994 aa16.16■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Cyp27a1Q9DBG1 533 aa16.16■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Pdcl2Q78Y63 240 aa16.15■□□□□ 0.18
Ssr1-203ENSMUST00000225246 DekQ7TNV0 380 aaKnown RBP16.15■□□□□ 0.18
Ssr1-203ENSMUST00000225246 PogkQ80TC5 607 aa16.15■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Rasa1E9PYG6 1038 aa16.15■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Ap3b2Q9JME5 1082 aa16.15■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Tpm2P58774 284 aa16.14■□□□□ 0.17
Ssr1-203ENSMUST00000225246 CatipB9EKE5 520 aa16.13■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Mcm10Q0VBD2 885 aa16.13■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Stk31Q99MW1 1018 aa16.13■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Triml2E9PW10 424 aa16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Dhx16G3X8X0 1044 aaKnown RBP16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Hoxa7P02830 229 aa16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 U2surpQ6NV83 1029 aaKnown RBP16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Sirt1Q923E4 737 aa16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Slit2Q9R1B9 1521 aa16.12■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Atg4a-psA0A0G2JFS9 396 aa16.11■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Atg4aQ8C9S8 396 aa16.11■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Klhdc4Q921I2 584 aa16.11■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Ercc6l2Q9JIM3 1537 aa16.11■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Pik3c2bE9QAN8 1632 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Astn2Q80Z10 1352 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Eif4a2P10630 407 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Prkar2bP31324 416 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Zdhhc9P59268 364 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Fez1Q8K0X8 392 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Cyp46a1Q9WVK8 500 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 NpatQ8BMA5 1420 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Erc2Q6PH08 957 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 DmtnQ9WV69 405 aa16.1■□□□□ 0.17
Ssr1-203ENSMUST00000225246 NalcnQ8BXR5 1738 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Aifm3Q3TY86 605 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 4931400O07RikQ9D4M5 137 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Chd4Q6PDQ2 1915 aaKnown RBP16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Znf335A2A5K6 1337 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 CemipQ8BI06 1361 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 RictorQ6QI06 1708 aa16.09■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Zfp777B9EKF4 885 aa16.08■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Tnrc6bQ8BKI2 1810 aaKnown RBP16.08■□□□□ 0.17
Ssr1-203ENSMUST00000225246 Vwa3bJ9JI28 736 aa16.08■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Glipr1l2Q9CQ35 332 aa16.08■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Zkscan16A2ALW2 728 aa16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Nol8Q3UHX0 1147 aaKnown RBP16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Tex2Q6ZPJ0 1128 aaKnown RBP16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Afap1Q80YS6 731 aa16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Smarca5Q91ZW3 1051 aaKnown RBP16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Igsf1Q7TQA1 1317 aa16.07■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Zkscan2G3X952 960 aa16.05■□□□□ 0.16
Ssr1-203ENSMUST00000225246 LlphQ9D945 130 aaKnown RBP16.05■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Gm45015A0A140LII9 184 aa16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Gm18336A0A140LIU8 765 aa16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Gm9992B2RWK3 458 aa16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Anapc15P60007 132 aa16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Unc93aQ710D3 458 aa16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Noc3lQ8VI84 807 aaKnown RBP16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Msh6P54276 1358 aaKnown RBP16.04■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Trpm3Q5F4S9 1721 aa16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Kdm4aQ8BW72 1064 aa16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Q9D2X8 372 aa16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Asxl2Q8BZ32 1370 aa16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 TmpoQ61033 693 aaKnown RBP16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 AnlnQ8K298 1121 aaKnown RBP16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Ush1cQ9ES64 910 aa16.03■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Atp6v1dP57746 247 aa16.02■□□□□ 0.16
Ssr1-203ENSMUST00000225246 MpripP97434 1024 aa16.02■□□□□ 0.16
Ssr1-203ENSMUST00000225246 VgfQ0VGU4 617 aa16.02■□□□□ 0.16
Ssr1-203ENSMUST00000225246 NexnQ7TPW1 607 aa16.02■□□□□ 0.16
Ssr1-203ENSMUST00000225246 Dip2bQ3UH60 1574 aa16.02■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Rtf1A2AQ19 715 aaKnown RBP16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 PtmaP26350 111 aa16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Senp3Q9EP97 568 aaKnown RBP16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 N4bp2F8VQG7 1678 aaKnown RBP16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Slit3Q9WVB4 1523 aa16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 FancaQ9JL70 1439 aa16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Gnai2P08752 355 aaKnown RBP16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 RestQ8VIG1 1082 aa16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Nphp1Q9QY53 687 aa16.01■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Stk11ipQ3TAA7 1072 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Znf692Q3U381 531 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Gse1Q3U3C9 1213 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ecm2Q5FW85 670 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Znf316Q6PGE4 1016 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Sv2bQ8BG39 683 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Gdpd2Q9ESM6 539 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Bcar3Q9QZK2 820 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ptpn23Q6PB44 1692 aa16■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Stk36Q69ZM6 1316 aa15.99■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Rims2Q9EQZ7 1530 aa15.99■□□□□ 0.15
Ssr1-203ENSMUST00000225246 PzpQ61838 1495 aa15.99■□□□□ 0.15
Ssr1-203ENSMUST00000225246 MccE9PWI3 1003 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Mmp8O70138 465 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Tbc1d30Q69ZT9 766 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Becn1O88597 448 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Atp8b2P98199 1209 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms