RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Zfp777B9EKF4 885 aa26.32■■□□□ 1.8
Trim9-208ENSMUST00000221370 Bag4Q8CI61 457 aa26.31■■□□□ 1.8
Trim9-208ENSMUST00000221370 Aifm3Q3TY86 605 aa26.3■■□□□ 1.8
Trim9-208ENSMUST00000221370 Zkscan1Q8BGS3 561 aaKnown RBP26.3■■□□□ 1.8
Trim9-208ENSMUST00000221370 Tet3Q8BG87 1668 aa26.3■■□□□ 1.8
Trim9-208ENSMUST00000221370 DekQ7TNV0 380 aaKnown RBP26.29■■□□□ 1.8
Trim9-208ENSMUST00000221370 Rnf123Q5XPI3 1314 aa26.29■■□□□ 1.8
Trim9-208ENSMUST00000221370 Frmpd2A0A140LI67 1392 aa26.29■■□□□ 1.8
Trim9-208ENSMUST00000221370 CemipQ8BI06 1361 aa26.29■■□□□ 1.8
Trim9-208ENSMUST00000221370 Prkar2bP31324 416 aa26.28■■□□□ 1.8
Trim9-208ENSMUST00000221370 Dip2bQ3UH60 1574 aa26.28■■□□□ 1.8
Trim9-208ENSMUST00000221370 MpripP97434 1024 aa26.28■■□□□ 1.8
Trim9-208ENSMUST00000221370 Bloc1s4Q8VED2 215 aa26.28■■□□□ 1.8
Trim9-208ENSMUST00000221370 Txndc2Q6P902 515 aa26.27■■□□□ 1.8
Trim9-208ENSMUST00000221370 Dmrtc1Q9D9R7 182 aa26.27■■□□□ 1.8
Trim9-208ENSMUST00000221370 NalcnQ8BXR5 1738 aa26.26■■□□□ 1.79
Trim9-208ENSMUST00000221370 Tmx3Q8BXZ1 456 aa26.26■■□□□ 1.79
Trim9-208ENSMUST00000221370 Slit2Q9R1B9 1521 aa26.26■■□□□ 1.79
Trim9-208ENSMUST00000221370 Plin1Q8CGN5 517 aa26.26■■□□□ 1.79
Trim9-208ENSMUST00000221370 PtmsQ9D0J8 101 aaKnown RBP26.26■■□□□ 1.79
Trim9-208ENSMUST00000221370 TmpoQ61033 693 aaKnown RBP26.25■■□□□ 1.79
Trim9-208ENSMUST00000221370 Trim44Q9QXA7 346 aa26.25■■□□□ 1.79
Trim9-208ENSMUST00000221370 Atg4a-psA0A0G2JFS9 396 aa26.24■■□□□ 1.79
Trim9-208ENSMUST00000221370 Atg4aQ8C9S8 396 aa26.24■■□□□ 1.79
Trim9-208ENSMUST00000221370 Cyp46a1Q9WVK8 500 aa26.24■■□□□ 1.79
Trim9-208ENSMUST00000221370 Slit3Q9WVB4 1523 aa26.24■■□□□ 1.79
Trim9-208ENSMUST00000221370 Ppp1r18Q8BQ30 594 aa26.23■■□□□ 1.79
Trim9-208ENSMUST00000221370 Cyp27a1Q9DBG1 533 aa26.23■■□□□ 1.79
Trim9-208ENSMUST00000221370 Mrps27Q8BK72 415 aaKnown RBP26.22■■□□□ 1.79
Trim9-208ENSMUST00000221370 ScaperF8VQ70 1398 aaKnown RBP26.22■■□□□ 1.79
Trim9-208ENSMUST00000221370 SlkO54988 1233 aa26.22■■□□□ 1.79
Trim9-208ENSMUST00000221370 Paxip1Q6NZQ4 1056 aa26.22■■□□□ 1.79
Trim9-208ENSMUST00000221370 Smarca5Q91ZW3 1051 aaKnown RBP26.22■■□□□ 1.79
Trim9-208ENSMUST00000221370 Ap3b2Q9JME5 1082 aa26.21■■□□□ 1.79
Trim9-208ENSMUST00000221370 ImpactO55091 318 aa26.21■■□□□ 1.79
Trim9-208ENSMUST00000221370 N4bp2F8VQG7 1678 aaKnown RBP26.21■■□□□ 1.79
Trim9-208ENSMUST00000221370 Erc2Q6PH08 957 aa26.2■■□□□ 1.79
Trim9-208ENSMUST00000221370 1700019A02RikA0A087WPV9 146 aa26.19■■□□□ 1.78
Trim9-208ENSMUST00000221370 IghaA0A0A6YXW6 389 aa26.19■■□□□ 1.78
Trim9-208ENSMUST00000221370 Igsf1Q7TQA1 1317 aa26.18■■□□□ 1.78
Trim9-208ENSMUST00000221370 Rasa1E9PYG6 1038 aa26.18■■□□□ 1.78
Trim9-208ENSMUST00000221370 Rrp12Q6P5B0 1295 aaKnown RBP26.18■■□□□ 1.78
Trim9-208ENSMUST00000221370 Sv2bQ8BG39 683 aa26.17■■□□□ 1.78
Trim9-208ENSMUST00000221370 PzpQ61838 1495 aa26.16■■□□□ 1.78
Trim9-208ENSMUST00000221370 Hoxa7P02830 229 aa26.16■■□□□ 1.78
Trim9-208ENSMUST00000221370 Ddrgk1Q80WW9 315 aa26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 Chd2E9PZM4 1827 aaKnown RBP26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 Rtf1A2AQ19 715 aaKnown RBP26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 Zkscan2G3X952 960 aa26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 Ggnbp2Q5SV77 696 aa26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 Q9D2X8 372 aa26.15■■□□□ 1.78
Trim9-208ENSMUST00000221370 HnrnpmQ9D0E1 729 aaKnown RBP26.14■■□□□ 1.78
Trim9-208ENSMUST00000221370 Trpm3Q5F4S9 1721 aa26.13■■□□□ 1.77
Trim9-208ENSMUST00000221370 Gnai2P08752 355 aaKnown RBP26.13■■□□□ 1.77
Trim9-208ENSMUST00000221370 Msh6P54276 1358 aaKnown RBP26.12■■□□□ 1.77
Trim9-208ENSMUST00000221370 Rims2Q9EQZ7 1530 aa26.12■■□□□ 1.77
Trim9-208ENSMUST00000221370 Arap3Q8R5G7 1538 aa26.12■■□□□ 1.77
Trim9-208ENSMUST00000221370 Ubr1O70481 1757 aa26.11■■□□□ 1.77
Trim9-208ENSMUST00000221370 Zkscan16A2ALW2 728 aa26.11■■□□□ 1.77
Trim9-208ENSMUST00000221370 FancaQ9JL70 1439 aa26.11■■□□□ 1.77
Trim9-208ENSMUST00000221370 Ptpn23Q6PB44 1692 aa26.11■■□□□ 1.77
Trim9-208ENSMUST00000221370 Q3UJC8 639 aa26.11■■□□□ 1.77
Trim9-208ENSMUST00000221370 Nphp1Q9QY53 687 aa26.1■■□□□ 1.77
Trim9-208ENSMUST00000221370 Pibf1E9Q6K3 756 aa26.1■■□□□ 1.77
Trim9-208ENSMUST00000221370 Prim1P20664 417 aa26.1■■□□□ 1.77
Trim9-208ENSMUST00000221370 Stk11ipQ3TAA7 1072 aa26.1■■□□□ 1.77
Trim9-208ENSMUST00000221370 Col16a1Q8BLX7 1580 aa26.09■■□□□ 1.77
Trim9-208ENSMUST00000221370 Zdhhc9P59268 364 aa26.09■■□□□ 1.77
Trim9-208ENSMUST00000221370 Nol8Q3UHX0 1147 aaKnown RBP26.09■■□□□ 1.77
Trim9-208ENSMUST00000221370 Bcar3Q9QZK2 820 aa26.09■■□□□ 1.77
Trim9-208ENSMUST00000221370 Pik3c2aQ61194 1686 aa26.08■■□□□ 1.77
Trim9-208ENSMUST00000221370 Rreb1Q3UH06 1700 aaKnown RBP26.08■■□□□ 1.77
Trim9-208ENSMUST00000221370 Vwa3bJ9JI28 736 aa26.07■■□□□ 1.76
Trim9-208ENSMUST00000221370 Rad17Q6NXW6 688 aa26.07■■□□□ 1.76
Trim9-208ENSMUST00000221370 RestQ8VIG1 1082 aa26.07■■□□□ 1.76
Trim9-208ENSMUST00000221370 Noc3lQ8VI84 807 aaKnown RBP26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 LlphQ9D945 130 aaKnown RBP26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 Foxp4Q9DBY0 795 aaKnown RBP26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 Stk36Q69ZM6 1316 aa26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 Mmp8O70138 465 aa26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 Srgap3Q812A2 1099 aa26.06■■□□□ 1.76
Trim9-208ENSMUST00000221370 Anapc15P60007 132 aa26.05■■□□□ 1.76
Trim9-208ENSMUST00000221370 AnlnQ8K298 1121 aaKnown RBP26.05■■□□□ 1.76
Trim9-208ENSMUST00000221370 Map2P20357 1828 aa26.05■■□□□ 1.76
Trim9-208ENSMUST00000221370 Scn7aB1AYL1 1681 aa26.05■■□□□ 1.76
Trim9-208ENSMUST00000221370 Ppp1r42Q8R1Z4 357 aa26.05■■□□□ 1.76
Trim9-208ENSMUST00000221370 Parp14Q2EMV9 1817 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 Ptpdc1Q6NZK8 747 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 NexnQ7TPW1 607 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 4931400O07RikQ9D4M5 137 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 Atp8b2P98199 1209 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 Glipr1l2Q9CQ35 332 aa26.04■■□□□ 1.76
Trim9-208ENSMUST00000221370 MccE9PWI3 1003 aa26.03■■□□□ 1.76
Trim9-208ENSMUST00000221370 Eya1P97767 591 aa26.03■■□□□ 1.76
Trim9-208ENSMUST00000221370 Camta1A2A891 1682 aa26.03■■□□□ 1.76
Trim9-208ENSMUST00000221370 Mon2Q80TL7 1715 aa26.02■■□□□ 1.76
Trim9-208ENSMUST00000221370 Atp6v1dP57746 247 aa26.02■■□□□ 1.76
Trim9-208ENSMUST00000221370 Fam83gQ5SWY7 812 aa26.02■■□□□ 1.76
Trim9-208ENSMUST00000221370 Abcc10Q8R4P9 1501 aa26.02■■□□□ 1.76
Trim9-208ENSMUST00000221370 Gm45015A0A140LII9 184 aa26■■□□□ 1.75
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms