RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Catsper2A2ARP9 588 aa16.04■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Dnajc10Q9DC23 793 aa16.04■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Rnf17Q99MV7 1640 aa16.04■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 TefQ9JLC6 301 aa16.04■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Nsd3Q6P2L6 1439 aa16.03■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Anapc15P60007 132 aa16.03■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Taok2Q6ZQ29 1240 aa16.03■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Smc3Q9CW03 1217 aaKnown RBP16.03■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Ttc21aQ8C0S4 1314 aa16.02■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 KinQ8K339 391 aa16.02■□□□□ 0.16
Pdgfra-205ENSMUST00000201711 Brd1E9PZ26 1189 aaKnown RBP16.02■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Gm32742A0A1B0GT42 1604 aa16.02■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Abcc3B2RX12 1523 aa16.01■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Tbc1d32Q3URV1 1296 aa16.01■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Adamts13Q769J6 1426 aa16.01■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Smc4Q8CG47 1286 aa16.01■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Ddx11Q6AXC6 880 aa16■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 AnkarA2RT91 1465 aa16■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Zkscan1Q8BGS3 561 aaKnown RBP15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Dzip1Q8BMD2 852 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Nlgn1Q99K10 843 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Kif20aP97329 887 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Terf2O35144 541 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Dixdc1Q80Y83 711 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Mical1Q8VDP3 1048 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Kcnh5Q920E3 988 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 TimelessQ9R1X4 1197 aa15.99■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Hoxb7P09024 217 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Plch2A2AP18 1501 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Brf1Q8CFK2 676 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Uhrf1bp1lA2RSJ4 1457 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Hs1bp3Q3TC93 395 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Gpatch11Q3UFS4 262 aa15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Smg7Q5RJH6 1138 aaKnown RBP15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Sf3a1Q8K4Z5 791 aaKnown RBP15.98■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 NexnQ7TPW1 607 aa15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 PnnO35691 725 aaKnown RBP15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Slc26a8Q8R0C3 999 aa15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Isy1Q69ZQ2 285 aaKnown RBP15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Pof1bQ8K4L4 587 aa15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Fam135bQ9DAI6 1403 aa15.97■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Ttc19Q8CC21 365 aa15.96■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Ccer1Q9CQL2 403 aa15.96■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Utp3Q9JI13 469 aaKnown RBP15.96■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Map3k2Q61083 619 aa15.96■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 Farp2Q91VS8 1065 aa15.96■□□□□ 0.15
Pdgfra-205ENSMUST00000201711 VgfQ0VGU4 617 aa15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ddx17Q501J6 650 aaKnown RBP15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Trim28Q62318 834 aa15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Zbtb45Q52KG4 520 aa15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Slc35g1Q8BY79 368 aa15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Zfyve16Q80U44 1528 aa15.95■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 NhsB1AV60 1647 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Mcm4P49717 862 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Nap1l3Q794H2 544 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Gripap1Q8VD04 806 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Hoxc9P09633 260 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Pa2g4P50580 394 aaKnown RBP15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Top1mtQ8R4U6 593 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Il1rapl2Q9ERS6 686 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Rnf20Q5DTM8 973 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Q9D9S1 216 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Abca6Q8K441 1624 aa15.94■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ints3Q7TPD0 1041 aaKnown RBP15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Zmym3Q9JLM4 1370 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Synj2Q9D2G5 1434 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ppfia3P60469 1194 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 GpkowQ56A08 488 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 R3hcc1Q8BSI6 488 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Sytl4Q9R0Q1 673 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Sh3bgrQ9WUZ7 214 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Uggt2E9Q4X2 1504 aa15.93■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Cdc42bpbQ7TT50 1713 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ak9G3UYQ4 1894 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 LifrP42703 1092 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Abca8bQ8K440 1620 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Kdm5aQ3UXZ9 1690 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ankib1Q6ZPS6 1085 aa15.92■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Pdia3P27773 505 aaKnown RBP15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Nol11Q8BJW5 723 aaKnown RBP15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Dnajc5gQ8C632 165 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Bicd2Q921C5 820 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Stard3nlQ9DCI3 235 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Kif4P33174 1231 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Tceanc2Q8R2M0 207 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Rrs1Q9CYH6 365 aaKnown RBP15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ttc41Q692V3 1318 aa15.91■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 KdrP35918 1367 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 F2rP30558 430 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Slc39a6Q8C145 765 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 4930572O03RikQ8C5Y0 211 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 AnlnQ8K298 1121 aaKnown RBP15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ush1cQ9ES64 910 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Pcdh10E9PXQ7 1057 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 EvcP57680 1005 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Ltv1Q6NSQ7 470 aaKnown RBP15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Soga3Q6NZL0 945 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Slc5a1Q8C3K6 665 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Fkbp5Q64378 456 aa15.9■□□□□ 0.14
Pdgfra-205ENSMUST00000201711 Paxip1Q6NZQ4 1056 aa15.89■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms