RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Trpc5Q9QX29 975 aa17.56■□□□□ 0.4
Chfr-212ENSMUST00000200038 Slc5a1Q8C3K6 665 aa17.55■□□□□ 0.4
Chfr-212ENSMUST00000200038 Adgrb1Q3UHD1 1582 aa17.54■□□□□ 0.4
Chfr-212ENSMUST00000200038 Fam198bQ3UPI1 517 aa17.54■□□□□ 0.4
Chfr-212ENSMUST00000200038 Akt1s1Q9D1F4 257 aa17.54■□□□□ 0.4
Chfr-212ENSMUST00000200038 Plin1Q8CGN5 517 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 Chmp7Q8R1T1 451 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 Slc12a5Q91V14 1138 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 HypkQ9CR41 129 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 Kcnq2Q9Z351 759 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 FocadA2AKG8 1798 aa17.53■□□□□ 0.4
Chfr-212ENSMUST00000200038 Rab11fip3Q8CHD8 1047 aa17.52■□□□□ 0.4
Chfr-212ENSMUST00000200038 IncenpQ9WU62 880 aa17.52■□□□□ 0.4
Chfr-212ENSMUST00000200038 Bicdl1A0JNT9 577 aa17.51■□□□□ 0.39
Chfr-212ENSMUST00000200038 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.5■□□□□ 0.39
Chfr-212ENSMUST00000200038 Jdp2P97875 163 aa17.5■□□□□ 0.39
Chfr-212ENSMUST00000200038 Nlrp6Q91WS2 869 aa17.5■□□□□ 0.39
Chfr-212ENSMUST00000200038 Phkg2Q9DB30 406 aa17.5■□□□□ 0.39
Chfr-212ENSMUST00000200038 NppbP40753 121 aa17.49■□□□□ 0.39
Chfr-212ENSMUST00000200038 Fchsd2Q3USJ8 740 aa17.49■□□□□ 0.39
Chfr-212ENSMUST00000200038 MeiocA2AG06 965 aa17.48■□□□□ 0.39
Chfr-212ENSMUST00000200038 Ubxn2bQ0KL01 331 aa17.48■□□□□ 0.39
Chfr-212ENSMUST00000200038 Egfem1Q8C088 590 aa17.48■□□□□ 0.39
Chfr-212ENSMUST00000200038 Amotl1Q9D4H4 968 aa17.48■□□□□ 0.39
Chfr-212ENSMUST00000200038 Hdac6Q9Z2V5 1149 aa17.48■□□□□ 0.39
Chfr-212ENSMUST00000200038 Igsf1Q7TQA1 1317 aa17.47■□□□□ 0.39
Chfr-212ENSMUST00000200038 Ahnak2E9PYB0 1738 aaKnown RBP17.47■□□□□ 0.39
Chfr-212ENSMUST00000200038 Asic4Q7TNS7 539 aa17.47■□□□□ 0.39
Chfr-212ENSMUST00000200038 Chrna2Q91X60 512 aa17.47■□□□□ 0.39
Chfr-212ENSMUST00000200038 Jmjd4Q8BFT6 427 aa17.46■□□□□ 0.39
Chfr-212ENSMUST00000200038 Ssfa2Q922B9 1252 aa17.46■□□□□ 0.39
Chfr-212ENSMUST00000200038 Pdzd9Q9D9M4 266 aa17.46■□□□□ 0.39
Chfr-212ENSMUST00000200038 Kcna3P16390 528 aa17.43■□□□□ 0.38
Chfr-212ENSMUST00000200038 Ppm1fQ8CGA0 452 aa17.43■□□□□ 0.38
Chfr-212ENSMUST00000200038 Anp32bQ9EST5 272 aaKnown RBP17.43■□□□□ 0.38
Chfr-212ENSMUST00000200038 PalmQ9Z0P4 383 aa17.43■□□□□ 0.38
Chfr-212ENSMUST00000200038 TnikP83510 1323 aa17.43■□□□□ 0.38
Chfr-212ENSMUST00000200038 AtrnQ9WU60 1428 aa17.42■□□□□ 0.38
Chfr-212ENSMUST00000200038 Parp14Q2EMV9 1817 aa17.42■□□□□ 0.38
Chfr-212ENSMUST00000200038 Tsen2Q6P7W5 460 aa17.41■□□□□ 0.38
Chfr-212ENSMUST00000200038 Stk31Q99MW1 1018 aa17.41■□□□□ 0.38
Chfr-212ENSMUST00000200038 Iqcf3Q9D498 203 aa17.41■□□□□ 0.38
Chfr-212ENSMUST00000200038 Tns2Q8CGB6 1400 aa17.4■□□□□ 0.38
Chfr-212ENSMUST00000200038 Smarcc1P97496 1104 aa17.4■□□□□ 0.38
Chfr-212ENSMUST00000200038 Ppp2r1aQ76MZ3 589 aa17.4■□□□□ 0.38
Chfr-212ENSMUST00000200038 Mcm10Q0VBD2 885 aa17.39■□□□□ 0.37
Chfr-212ENSMUST00000200038 ErfeQ6PGN1 340 aa17.39■□□□□ 0.37
Chfr-212ENSMUST00000200038 Ints5Q8CHT3 1018 aa17.39■□□□□ 0.37
Chfr-212ENSMUST00000200038 Atg3Q9CPX6 314 aa17.39■□□□□ 0.37
Chfr-212ENSMUST00000200038 Mtfr1lQ9CWE0 289 aa17.39■□□□□ 0.37
Chfr-212ENSMUST00000200038 Crb1Q8VHS2 1405 aa17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 Arfgef2A2A5R2 1792 aa17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 Smg7Q5RJH6 1138 aaKnown RBP17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 Emilin1Q99K41 1017 aa17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 U2af1Q9D883 239 aaKnown RBP17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 CoblQ5NBX1 1337 aaKnown RBP17.38■□□□□ 0.37
Chfr-212ENSMUST00000200038 Msl1Q6PDM1 616 aa17.37■□□□□ 0.37
Chfr-212ENSMUST00000200038 Dcaf5Q80T85 946 aa17.37■□□□□ 0.37
Chfr-212ENSMUST00000200038 Hirip3Q8BLH7 601 aa17.37■□□□□ 0.37
Chfr-212ENSMUST00000200038 P2rx7Q9Z1M0 595 aa17.37■□□□□ 0.37
Chfr-212ENSMUST00000200038 TmpoQ61033 693 aaKnown RBP17.36■□□□□ 0.37
Chfr-212ENSMUST00000200038 GsdmaQ9EST1 446 aa17.35■□□□□ 0.37
Chfr-212ENSMUST00000200038 Aox2Q5SGK3 1345 aa17.35■□□□□ 0.37
Chfr-212ENSMUST00000200038 Gm13023A2A8N2 498 aa17.34■□□□□ 0.37
Chfr-212ENSMUST00000200038 Miga2Q8BK03 593 aa17.34■□□□□ 0.37
Chfr-212ENSMUST00000200038 Zcwpw1Q6IR42 630 aa17.33■□□□□ 0.36
Chfr-212ENSMUST00000200038 Ccdc155Q80VJ8 648 aa17.33■□□□□ 0.36
Chfr-212ENSMUST00000200038 Cap2Q9CYT6 476 aa17.33■□□□□ 0.36
Chfr-212ENSMUST00000200038 Mapk8ip2Q9ERE9 830 aa17.33■□□□□ 0.36
Chfr-212ENSMUST00000200038 Magea6O89010 325 aa17.32■□□□□ 0.36
Chfr-212ENSMUST00000200038 Magea3Q6T340 320 aa17.32■□□□□ 0.36
Chfr-212ENSMUST00000200038 Col23a1Q8K4G2 532 aa17.32■□□□□ 0.36
Chfr-212ENSMUST00000200038 Sumf1Q8R0F3 372 aa17.32■□□□□ 0.36
Chfr-212ENSMUST00000200038 Rtf1A2AQ19 715 aaKnown RBP17.31■□□□□ 0.36
Chfr-212ENSMUST00000200038 Pde4dQ01063 747 aa17.31■□□□□ 0.36
Chfr-212ENSMUST00000200038 RtcbQ99LF4 505 aaKnown RBP17.31■□□□□ 0.36
Chfr-212ENSMUST00000200038 DiexfQ8BTT6 772 aaKnown RBP17.3■□□□□ 0.36
Chfr-212ENSMUST00000200038 Znrd1-asQ8R0E5 213 aa17.3■□□□□ 0.36
Chfr-212ENSMUST00000200038 Kcnn1Q9EQR3 537 aa17.3■□□□□ 0.36
Chfr-212ENSMUST00000200038 Rnf180Q3U827 592 aa17.29■□□□□ 0.36
Chfr-212ENSMUST00000200038 Lrrc43Q3V0L5 667 aa17.29■□□□□ 0.36
Chfr-212ENSMUST00000200038 Cabp2Q9JLK4 216 aa17.29■□□□□ 0.36
Chfr-212ENSMUST00000200038 Msh6P54276 1358 aaKnown RBP17.28■□□□□ 0.36
Chfr-212ENSMUST00000200038 Ppef1O35655 650 aa17.28■□□□□ 0.36
Chfr-212ENSMUST00000200038 Rad23bP54728 416 aa17.28■□□□□ 0.36
Chfr-212ENSMUST00000200038 Efcab2Q9CQ46 164 aa17.27■□□□□ 0.36
Chfr-212ENSMUST00000200038 Usp21Q9QZL6 566 aa17.27■□□□□ 0.36
Chfr-212ENSMUST00000200038 Spata31d1bE9QA57 1361 aa17.27■□□□□ 0.35
Chfr-212ENSMUST00000200038 Sos1Q62245 1319 aa17.26■□□□□ 0.35
Chfr-212ENSMUST00000200038 Prom2Q3UUY6 835 aa17.26■□□□□ 0.35
Chfr-212ENSMUST00000200038 Mrps5Q99N87 432 aaKnown RBP17.26■□□□□ 0.35
Chfr-212ENSMUST00000200038 Wdr66E9Q743 1299 aa17.25■□□□□ 0.35
Chfr-212ENSMUST00000200038 AceP09470 1312 aa17.24■□□□□ 0.35
Chfr-212ENSMUST00000200038 Tcerg1Q8CGF7 1100 aaKnown RBP17.24■□□□□ 0.35
Chfr-212ENSMUST00000200038 PappaQ8R4K8 1624 aa17.24■□□□□ 0.35
Chfr-212ENSMUST00000200038 Abca3Q8R420 1704 aa17.24■□□□□ 0.35
Chfr-212ENSMUST00000200038 Snap23O09044 210 aa17.23■□□□□ 0.35
Chfr-212ENSMUST00000200038 Shank3Q4ACU6 1730 aa17.23■□□□□ 0.35
Chfr-212ENSMUST00000200038 Mapk8ip3Q9ESN9 1337 aa17.22■□□□□ 0.35
Chfr-212ENSMUST00000200038 Amhr2Q8K592 568 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 88 ms