RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Tns2Q8CGB6 1400 aa18.29■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Arfgef2A2A5R2 1792 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Gm21663A0A0G2JE01 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Gm7361D3Z6R1 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 5031410I06RikE9Q4E0 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Gm1979E9QAN3 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Gm5862K7N5V5 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Gm10220K7N660 267 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 NrdcQ8BHG1 1161 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Slc5a1Q8C3K6 665 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Golga2Q921M4 999 aa18.28■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Map4k4P97820 1233 aaKnown RBP18.27■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Afg3l2Q8JZQ2 802 aaKnown RBP18.27■□□□□ 0.52
Ercc1-203ENSMUST00000160369 ApobrQ8VBT6 942 aa18.27■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Ssfa2Q922B9 1252 aa18.27■□□□□ 0.52
Ercc1-203ENSMUST00000160369 Adamtsl1Q8BLI0 1745 aa18.26■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Tcerg1Q8CGF7 1100 aaKnown RBP18.26■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Pdzd9Q9D9M4 266 aa18.26■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Rtf1A2AQ19 715 aaKnown RBP18.25■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Larp1Q6ZQ58 1072 aaKnown RBP18.25■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Bsdc1Q80Y55 427 aa18.25■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Cabp2Q9JLK4 216 aa18.25■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Rps6ka4Q9Z2B9 773 aa18.25■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Aox2Q5SGK3 1345 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Arhgap33Q80YF9 1305 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Vars2Q3U2A8 1060 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Q4VA45 678 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Asic4Q7TNS7 539 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Ciz1Q8VEH2 845 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Znf541Q0GGX2 1363 aa18.24■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Trpm3Q5F4S9 1721 aa18.23■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Cavin4A2AMM0 362 aa18.22■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Apaf1O88879 1249 aa18.22■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Apba2P98084 750 aa18.22■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Ccnl1Q52KE7 532 aaKnown RBP18.22■□□□□ 0.51
Ercc1-203ENSMUST00000160369 PappaQ8R4K8 1624 aa18.21■□□□□ 0.51
Ercc1-203ENSMUST00000160369 Pnpla7A2AJ88 1352 aa18.2■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Esx1O88933 382 aa18.2■□□□□ 0.5
Ercc1-203ENSMUST00000160369 OscarQ8VBT3 265 aa18.2■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Sos2Q02384 1333 aa18.2■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Abcc12Q80WJ6 1366 aa18.19■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Klc3Q91W40 508 aa18.19■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Crb1Q8VHS2 1405 aa18.17■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Swt1Q9DBQ9 907 aa18.17■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Pim2Q62070 370 aa18.16■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Sos1Q62245 1319 aa18.16■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Snapc4Q8BP86 1333 aa18.16■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Slc4a2P13808 1237 aaKnown RBP18.15■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Stra8P70278 393 aa18.15■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Kiaa0319lQ8K135 1048 aa18.15■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Hdac6Q9Z2V5 1149 aa18.15■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Usp19Q3UJD6 1360 aa18.15■□□□□ 0.5
Ercc1-203ENSMUST00000160369 Ankrd13dQ6PD24 605 aa18.14■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Q8BT18 775 aa18.14■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Supt5hO55201 1082 aaKnown RBP18.13■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Uspl1Q3ULM6 1089 aa18.13■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Jmjd4Q8BFT6 427 aa18.13■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Ncbp3Q8BZR9 615 aaKnown RBP18.13■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Ints5Q8CHT3 1018 aa18.13■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Erbb3Q61526 1339 aa18.12■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Kdm2bQ6P1G2 1309 aa18.12■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Snap23O09044 210 aa18.11■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Dusp27Q148W8 1138 aa18.11■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Mak16Q8BGS0 296 aaKnown RBP18.11■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Uhrf1bp1B2KF50 1429 aa18.11■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Ccdc155Q80VJ8 648 aa18.1■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Abca3Q8R420 1704 aa18.09■□□□□ 0.49
Ercc1-203ENSMUST00000160369 Smg7Q5RJH6 1138 aaKnown RBP18.08■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Btbd11Q6GQW0 1109 aa18.08■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Tjp1P39447 1745 aaKnown RBP18.08■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Ubr2Q6WKZ8 1755 aa18.07■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Atg3Q9CPX6 314 aa18.07■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Shank3Q4ACU6 1730 aa18.06■□□□□ 0.48
Ercc1-203ENSMUST00000160369 AceP09470 1312 aa18.06■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Pde4dQ01063 747 aa18.05■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Dcaf5Q80T85 946 aa18.05■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Efcab2Q9CQ46 164 aa18.05■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Nkx2-3P97334 362 aa18.04■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Myo5bP21271 1818 aa18.03■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Bicdl1A0JNT9 577 aa18.03■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Ralbp1Q62172 648 aa18.03■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Cers3Q1A3B0 383 aa18.02■□□□□ 0.48
Ercc1-203ENSMUST00000160369 CrbnQ8C7D2 445 aa18.02■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Anks4bQ8K3X6 423 aa18.02■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Cap2Q9CYT6 476 aa18.02■□□□□ 0.48
Ercc1-203ENSMUST00000160369 Gnai1B2RSH2 354 aa18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Ggnbp2Q5SV77 696 aa18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Ezh2Q61188 746 aaKnown RBP18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Speer4f1Q9D5Q6 258 aa18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Gnai3Q9DC51 354 aa18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Adcy9P51830 1353 aa18.01■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Igsf1Q7TQA1 1317 aa18■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Ric1Q69ZJ7 1422 aa18■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Prim1P20664 417 aa18■□□□□ 0.47
Ercc1-203ENSMUST00000160369 CoblQ5NBX1 1337 aaKnown RBP17.99■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Smarcc1P97496 1104 aa17.99■□□□□ 0.47
Ercc1-203ENSMUST00000160369 DiexfQ8BTT6 772 aaKnown RBP17.99■□□□□ 0.47
Ercc1-203ENSMUST00000160369 TefQ9JLC6 301 aa17.99■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Tiam2Q6ZPF3 1715 aa17.98■□□□□ 0.47
Ercc1-203ENSMUST00000160369 Mylk2Q8VCR8 613 aa17.98■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms