RNA–Protein interactions for RNA: ENSMUST00000120987.1

Trappc11-202, Transcript of Trafficking protein particle complex subunit 11, mousemouse

TSL 1 (best) BASIC

Gene Trappc11, Length 2,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11-202ENSMUST00000120987 Tns2Q8CGB6 1400 aa20.55■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Lrrc59Q922Q8 307 aaKnown RBP20.55■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Vamp4O70480 141 aa20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Nkx2-3P97334 362 aa20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Ccdc60Q8C4J0 545 aa20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Akap11E9Q777 1895 aa20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 SafbD3YXK2 937 aaKnown RBP20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Rtl5Q5DTT4 599 aa20.54■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Ccdc171E9Q1U1 1324 aa20.52■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Pak3Q61036 559 aa20.52■□□□□ 0.88
Trappc11-202ENSMUST00000120987 Plekhd1B2RPU2 505 aa20.52■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Kcnh8P59111 1102 aa20.52■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Abcc12Q80WJ6 1366 aa20.51■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Fam50bQ9WTJ8 334 aa20.51■□□□□ 0.87
Trappc11-202ENSMUST00000120987 1700123L14RikQ3V2K7 440 aa20.49■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Zpr1Q62384 459 aa20.49■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Gm6268A2A3U9 297 aa20.48■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Pibf1E9Q6K3 756 aa20.48■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Pank1Q8K4K6 548 aa20.48■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Slc5a4bQ91ZP4 660 aa20.48■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Pdzd9Q9D9M4 266 aa20.48■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Nsd3Q6P2L6 1439 aa20.47■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Foxp4Q9DBY0 795 aaKnown RBP20.47■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Dlg5E9Q9R9 1921 aa20.47■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Cc2d1aQ8K1A6 943 aa20.47■□□□□ 0.87
Trappc11-202ENSMUST00000120987 KarsQ99MN1 595 aaKnown RBP20.47■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Ubr2Q6WKZ8 1755 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 G3bp1P97855 465 aaKnown RBP20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Phkg2Q9DB30 406 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Msh6P54276 1358 aaKnown RBP20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Igsf1Q7TQA1 1317 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 1700019A02RikA0A087WPV9 146 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Trim58Q5NCC9 485 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 Plekhm2Q80TQ5 1018 aa20.46■□□□□ 0.87
Trappc11-202ENSMUST00000120987 4930572O03RikQ8C5Y0 211 aa20.45■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Ppp1r3fQ9JIG4 799 aa20.44■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Cyp2d12Q8BVD2 504 aa20.44■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Kat6bQ8BRB7 1872 aa20.44■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Fer1l6E0CZ42 1862 aa20.43■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Larp1Q6ZQ58 1072 aaKnown RBP20.42■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Nectin2P32507 530 aa20.42■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Rangap1P46061 589 aaKnown RBP20.42■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Znf521Q6KAS7 1311 aa20.42■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Myt1Q8CFC2 1127 aa20.41■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Asic4Q7TNS7 539 aa20.41■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Tspyl2Q7TQI8 677 aa20.41■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Speer4bQ9D9F7 267 aa20.4■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Nhsl1Q8CAF4 1587 aa20.4■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Shank2Q80Z38 1476 aa20.4■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Cavin2Q63918 418 aaKnown RBP20.39■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Tmco5bQ80X59 307 aa20.39■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Zeb2Q9R0G7 1215 aa20.39■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Mbd3Q9Z2D8 285 aaKnown RBP20.39■□□□□ 0.86
Trappc11-202ENSMUST00000120987 Chl1P70232 1209 aa20.39■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Ccdc155Q80VJ8 648 aa20.39■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Ssfa2Q922B9 1252 aa20.39■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Mast2Q60592 1734 aa20.39■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Atf5O70191 283 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Ggt6Q6PDE7 497 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Chmp7Q8R1T1 451 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Prkrip1Q9CWV6 186 aaKnown RBP20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Gm38655A0A286YDK6 273 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 NeflP08551 543 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Btbd11Q6GQW0 1109 aa20.38■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Gm21680A0A0G2JGR8 267 aa20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Eif4a1P60843 406 aaKnown RBP20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Chpf2Q3UU43 768 aa20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 MarsQ68FL6 902 aaKnown RBP20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Eif3bQ8JZQ9 803 aaKnown RBP20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 PappaQ8R4K8 1624 aa20.37■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Ccdc129Q14B48 1034 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Q3UPC7 1272 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Psrc1Q9D0P7 329 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Cacna1sQ02789 1880 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Lrp6O88572 1613 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Col1a2Q01149 1372 aa20.36■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Znf330Q922H9 316 aa20.35■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Sema6bO54951 886 aa20.34■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Cntnap1O54991 1385 aa20.34■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Q3TQI7 289 aaKnown RBP20.34■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Aldh1l1Q8R0Y6 902 aa20.34■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Tnrc6cQ3UHC0 1690 aaKnown RBP20.34■□□□□ 0.85
Trappc11-202ENSMUST00000120987 Nyap1Q6PFX7 833 aa20.33■□□□□ 0.85
Trappc11-202ENSMUST00000120987 BcorQ8CGN4 1759 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Gm21663A0A0G2JE01 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Gm7361D3Z6R1 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 5031410I06RikE9Q4E0 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Gm1979E9QAN3 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Gm5862K7N5V5 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Gm10220K7N660 267 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Tnnt1O88346 262 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Aplp1Q03157 653 aa20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Maco1Q7TQE6 664 aaKnown RBP20.33■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Kcnh4A2A5F7 1018 aa20.32■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Nutm1Q8BHP2 1126 aa20.32■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Slc5a1Q8C3K6 665 aa20.32■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Aifm3Q3TY86 605 aa20.31■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Irx6Q9ER75 438 aa20.31■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Tjp1P39447 1745 aaKnown RBP20.31■□□□□ 0.84
Trappc11-202ENSMUST00000120987 Nwd2Q6P5U7 1742 aa20.31■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms