RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Dnajc10Q9DC23 793 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Usp54Q8BL06 1588 aaKnown RBP10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Txnrd1Q9JMH6 613 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Ppip5k1A2ARP1 1436 aa10.62□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Gm45140A0A0N4SUM8 220 aa10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 G3bp1P97855 465 aaKnown RBP10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Ggnbp2Q5SV77 696 aa10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 TmpoQ61033 693 aaKnown RBP10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 NinlQ6ZQ12 1394 aa10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Fkbp4P30416 458 aa10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cnnm1Q0GA42 951 aa10.61□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Chd1lQ9CXF7 900 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Abca8bQ8K440 1620 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Hs1bp3Q3TC93 395 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Gas2l2Q5SSG4 860 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 RalgapbQ8BQZ4 1484 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Rbm25B2RY56 838 aaKnown RBP10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Nol12Q8BG17 217 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Calcoco2A2A6M5 331 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 U2af2P26369 475 aaKnown RBP10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Znf771Q8BJ90 317 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Stac3Q8BZ71 360 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Slc12a5Q91V14 1138 aa10.6□□□□□ -0.71
Col28a1-201ENSMUST00000115537 InsrP15208 1372 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cul7Q8VE73 1689 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Mast1Q9R1L5 1570 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Cavin4A2AMM0 362 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Zscan25B2RX31 543 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Fam184aE9PW83 1143 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Fez2Q6TYB5 348 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Tpm3P21107 285 aaKnown RBP10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Exoc5Q3TPX4 708 aa10.59□□□□□ -0.71
Col28a1-201ENSMUST00000115537 Anapc15-psA0A140T8L6 141 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Gnai1B2RSH2 354 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Mcm10Q0VBD2 885 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Emilin2Q8K482 1074 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Gnai3Q9DC51 354 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Phactr2B1AVP0 632 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 CastP51125 788 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Sh3bp1P55194 680 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Tbc1d9Q3UYK3 1264 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Kdm4aQ8BW72 1064 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Eif3bQ8JZQ9 803 aaKnown RBP10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Dync1i1O88485 628 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 CgnP59242 1191 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Frmd3Q8BHD4 595 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Amotl2Q8K371 772 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Clstn1Q9EPL2 979 aa10.58□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Rnf17Q99MV7 1640 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Adcy5P84309 1262 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Anp32eP97822 260 aaKnown RBP10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Anp32cQ64G17 123 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Atf7ipQ7TT18 1306 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Uspl1Q3ULM6 1089 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ppip5k2Q6ZQB6 1129 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Maco1Q7TQE6 664 aaKnown RBP10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Eno4Q8C042 619 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Dmrtc1Q9D9R7 182 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Trpm2Q91YD4 1506 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Bicdl1A0JNT9 577 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Smarce1O54941 411 aaKnown RBP10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ptgs1P22437 602 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ercc6lQ8BHK9 1240 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Irx4Q9QY61 515 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Elp1Q7TT37 1333 aaKnown RBP10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Cdc42bpaQ3UU96 1719 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 BcanQ61361 883 aa10.57□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Eva1cP58659 440 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 AU019823E9PUQ3 292 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 KdrP35918 1367 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Cdk13Q69ZA1 1511 aaKnown RBP10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Aplp1Q03157 653 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Slc4a10Q5DTL9 1118 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Slc5a1Q8C3K6 665 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Kdm4cQ8VCD7 1054 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Dnajc14Q921R4 703 aa10.56□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Lrrc7Q80TE7 1490 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Kif1bQ60575 1816 aaKnown RBP10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Abcc3B2RX12 1523 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Polr3gQ6NXY9 223 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Psrc1Q9D0P7 329 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Q9D2X8 372 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Hspa1lP16627 641 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Supt6hQ62383 1726 aaKnown RBP10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Cfdp1O88271 295 aaKnown RBP10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ppp1r15aP17564 657 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Gadd45bP22339 160 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ccdc155Q80VJ8 648 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 TefQ9JLC6 301 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Map3k19E9Q3S4 1311 aa10.55□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Kcna6Q61923 529 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 PalldQ9ET54 1408 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Dip2cE9PWR4 1557 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Wdr63B2RY71 923 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Nucb2P81117 420 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Atp2b3Q0VF55 1220 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 NexnQ7TPW1 607 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Nop14Q8R3N1 860 aaKnown RBP10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Setbp1Q9Z180 1582 aa10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 AppP12023 770 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms