RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 ThemisQ8BGW0 636 aa18.4■□□□□ 0.54
Trem1-202ENSMUST00000113251 Lrp6O88572 1613 aa18.4■□□□□ 0.54
Trem1-202ENSMUST00000113251 4930572O03RikQ8C5Y0 211 aa18.4■□□□□ 0.54
Trem1-202ENSMUST00000113251 Atxn3Q9CVD2 355 aa18.4■□□□□ 0.54
Trem1-202ENSMUST00000113251 Plekhh1Q80TI1 1356 aa18.39■□□□□ 0.53
Trem1-202ENSMUST00000113251 Upf2A2AT37 1269 aaKnown RBP18.38■□□□□ 0.53
Trem1-202ENSMUST00000113251 Abcc12Q80WJ6 1366 aa18.38■□□□□ 0.53
Trem1-202ENSMUST00000113251 Sema6bO54951 886 aa18.38■□□□□ 0.53
Trem1-202ENSMUST00000113251 Tns2Q8CGB6 1400 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 PrkcshO08795 521 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Ttc41Q692V3 1318 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Ubr2Q6WKZ8 1755 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Ankrd50F7BE84 1390 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Gnai1B2RSH2 354 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Gnai3Q9DC51 354 aa18.37■□□□□ 0.53
Trem1-202ENSMUST00000113251 Ttc21aQ8C0S4 1314 aa18.36■□□□□ 0.53
Trem1-202ENSMUST00000113251 Nwd2Q6P5U7 1742 aa18.36■□□□□ 0.53
Trem1-202ENSMUST00000113251 Sos1Q62245 1319 aa18.36■□□□□ 0.53
Trem1-202ENSMUST00000113251 PappaQ8R4K8 1624 aa18.36■□□□□ 0.53
Trem1-202ENSMUST00000113251 Ppp4r2Q0VGB7 417 aa18.35■□□□□ 0.53
Trem1-202ENSMUST00000113251 Pm20d1Q8C165 503 aa18.35■□□□□ 0.53
Trem1-202ENSMUST00000113251 Kank1E9Q238 1360 aa18.35■□□□□ 0.53
Trem1-202ENSMUST00000113251 Mst1rQ62190 1378 aa18.35■□□□□ 0.53
Trem1-202ENSMUST00000113251 NudcO35685 332 aaKnown RBP18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 Eif5bQ05D44 1216 aaKnown RBP18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 Fnbp4Q6ZQ03 1031 aa18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 MypopQ8R4U1 393 aa18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 Aox2Q5SGK3 1345 aa18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 InhbeO08717 350 aa18.34■□□□□ 0.53
Trem1-202ENSMUST00000113251 Dlg5E9Q9R9 1921 aa18.33■□□□□ 0.53
Trem1-202ENSMUST00000113251 Fam50bQ9WTJ8 334 aa18.33■□□□□ 0.52
Trem1-202ENSMUST00000113251 Eif3bQ8JZQ9 803 aaKnown RBP18.32■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ginm1Q91WR6 327 aa18.32■□□□□ 0.52
Trem1-202ENSMUST00000113251 Psrc1Q9D0P7 329 aa18.32■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ccdc129Q14B48 1034 aa18.31■□□□□ 0.52
Trem1-202ENSMUST00000113251 Sf3b2Q3UJB0 878 aaKnown RBP18.31■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ksr2Q3UVC0 959 aa18.31■□□□□ 0.52
Trem1-202ENSMUST00000113251 Cdc37l1Q9CZP7 335 aa18.31■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ccar1Q8CH18 1146 aaKnown RBP18.3■□□□□ 0.52
Trem1-202ENSMUST00000113251 Rbm25B2RY56 838 aaKnown RBP18.3■□□□□ 0.52
Trem1-202ENSMUST00000113251 Chmp7Q8R1T1 451 aa18.3■□□□□ 0.52
Trem1-202ENSMUST00000113251 Speer4bQ9D9F7 267 aa18.3■□□□□ 0.52
Trem1-202ENSMUST00000113251 Phkg2Q9DB30 406 aa18.3■□□□□ 0.52
Trem1-202ENSMUST00000113251 Kcnh4A2A5F7 1018 aa18.29■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ltbp1Q8CG19 1712 aa18.28■□□□□ 0.52
Trem1-202ENSMUST00000113251 Elp1Q7TT37 1333 aaKnown RBP18.28■□□□□ 0.52
Trem1-202ENSMUST00000113251 Vps33bP59016 617 aa18.28■□□□□ 0.52
Trem1-202ENSMUST00000113251 Pdzd9Q9D9M4 266 aa18.28■□□□□ 0.52
Trem1-202ENSMUST00000113251 Gm21680A0A0G2JGR8 267 aa18.27■□□□□ 0.52
Trem1-202ENSMUST00000113251 Snap23O09044 210 aa18.27■□□□□ 0.52
Trem1-202ENSMUST00000113251 L3mbtl2P59178 703 aa18.27■□□□□ 0.52
Trem1-202ENSMUST00000113251 Ssfa2Q922B9 1252 aa18.27■□□□□ 0.52
Trem1-202ENSMUST00000113251 Liat1Q810M6 228 aa18.26■□□□□ 0.51
Trem1-202ENSMUST00000113251 Ccdc171E9Q1U1 1324 aa18.25■□□□□ 0.51
Trem1-202ENSMUST00000113251 CastP51125 788 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gas2l2Q5SSG4 860 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Ggnbp2Q5SV77 696 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Sik1Q60670 779 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 U2surpQ6NV83 1029 aaKnown RBP18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Ankrd23Q812A3 306 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Eno4Q8C042 619 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Usp16Q99LG0 825 aa18.24■□□□□ 0.51
Trem1-202ENSMUST00000113251 Erbb3Q61526 1339 aa18.23■□□□□ 0.51
Trem1-202ENSMUST00000113251 Slc5a1Q8C3K6 665 aa18.23■□□□□ 0.51
Trem1-202ENSMUST00000113251 Tjp1P39447 1745 aaKnown RBP18.23■□□□□ 0.51
Trem1-202ENSMUST00000113251 Igsf1Q7TQA1 1317 aa18.23■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gm21663A0A0G2JE01 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gm7361D3Z6R1 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 5031410I06RikE9Q4E0 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gm1979E9QAN3 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gm5862K7N5V5 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Gm10220K7N660 267 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Exoc5Q3TPX4 708 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Tiam2Q6ZPF3 1715 aa18.22■□□□□ 0.51
Trem1-202ENSMUST00000113251 Asic4Q7TNS7 539 aa18.21■□□□□ 0.51
Trem1-202ENSMUST00000113251 Prim1P20664 417 aa18.21■□□□□ 0.51
Trem1-202ENSMUST00000113251 Shank3Q4ACU6 1730 aa18.2■□□□□ 0.5
Trem1-202ENSMUST00000113251 Cypt2Q6P924 180 aa18.2■□□□□ 0.5
Trem1-202ENSMUST00000113251 Rwdd1Q9CQK7 243 aa18.2■□□□□ 0.5
Trem1-202ENSMUST00000113251 Ddb1Q3U1J4 1140 aaKnown RBP18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Btbd11Q6GQW0 1109 aa18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Larp1Q6ZQ58 1072 aaKnown RBP18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Dmrt2Q8BG36 561 aa18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Klhdc4Q921I2 584 aa18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Foxp4Q9DBY0 795 aaKnown RBP18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 BcorQ8CGN4 1759 aa18.19■□□□□ 0.5
Trem1-202ENSMUST00000113251 Polr3glQ8R0C0 218 aa18.18■□□□□ 0.5
Trem1-202ENSMUST00000113251 Ly75Q60767 1723 aa18.17■□□□□ 0.5
Trem1-202ENSMUST00000113251 Ccdc9Q8VC31 543 aaKnown RBP18.17■□□□□ 0.5
Trem1-202ENSMUST00000113251 Ccdc60Q8C4J0 545 aa18.16■□□□□ 0.5
Trem1-202ENSMUST00000113251 Trim26Q99PN3 545 aa18.16■□□□□ 0.5
Trem1-202ENSMUST00000113251 Abca3Q8R420 1704 aa18.16■□□□□ 0.5
Trem1-202ENSMUST00000113251 Vamp4O70480 141 aa18.16■□□□□ 0.5
Trem1-202ENSMUST00000113251 Crb1Q8VHS2 1405 aa18.15■□□□□ 0.5
Trem1-202ENSMUST00000113251 Col1a2Q01149 1372 aa18.15■□□□□ 0.5
Trem1-202ENSMUST00000113251 Sgsm1Q8BPQ7 1093 aa18.14■□□□□ 0.5
Trem1-202ENSMUST00000113251 Ipo9Q91YE6 1041 aa18.14■□□□□ 0.5
Trem1-202ENSMUST00000113251 1700019A02RikA0A087WPV9 146 aa18.14■□□□□ 0.49
Trem1-202ENSMUST00000113251 Nkx2-3P97334 362 aa18.14■□□□□ 0.49
Trem1-202ENSMUST00000113251 Ccdc155Q80VJ8 648 aa18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms