RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Dzip1Q8BMD2 852 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Kdm2bQ6P1G2 1309 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Rbm25B2RY56 838 aaKnown RBP9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Swt1Q9DBQ9 907 aa9.33□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Becn1O88597 448 aa9.32□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Q4VA45 678 aa9.32□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Tspyl2Q7TQI8 677 aa9.32□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Mcm4P49717 862 aa9.32□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Abcc10Q8R4P9 1501 aa9.32□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Aplp1Q03157 653 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 TmpoQ61033 693 aaKnown RBP9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ppp1r3fQ9JIG4 799 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Wdr17E9Q271 1322 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 KdrP35918 1367 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Astn2Q80Z10 1352 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Gm21698A0A087WQP8 267 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Gm21671G3UY31 267 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Hoxc9P09633 260 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ssh1Q76I79 1042 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Smim5Q8BT42 78 aa9.31□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Usp16Q99LG0 825 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 PtmsQ9D0J8 101 aaKnown RBP9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Tmem2Q5FWI3 1383 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Prim1P20664 417 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Cluap1Q8R3P7 413 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 BbxQ8VBW5 907 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 C3P01027 1663 aa9.3□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Lmod3E9QA62 571 aa9.29□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ccar1Q8CH18 1146 aaKnown RBP9.29□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Rtf1A2AQ19 715 aaKnown RBP9.29□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Gm10471E9Q1C7 252 aa9.29□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Rimbp3Q3V0F0 1606 aa9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Cdc37l1Q9CZP7 335 aa9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Chmp4bQ9D8B3 224 aaKnown RBP9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Tnrc6bQ8BKI2 1810 aaKnown RBP9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Txnrd1Q9JMH6 613 aa9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Scn4aQ9ER60 1841 aa9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 MsnP26041 577 aaKnown RBP9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Iqsec2Q5DU25 1478 aa9.28□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Fmnl2A2APV2 1086 aa9.27□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Fchsd2Q3USJ8 740 aa9.27□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Gimap6Q8K349 305 aa9.27□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Ddx54Q8K4L0 874 aaKnown RBP9.27□□□□□ -0.92
Bdnf-203ENSMUST00000111043 Hoxb7P09024 217 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Pdlim2Q8R1G6 349 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Kcnn1Q9EQR3 537 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Znf335A2A5K6 1337 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Zranb3Q6NZP1 1069 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Fam50bQ9WTJ8 334 aa9.27□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ttc41Q692V3 1318 aa9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Tmed8Q3UHI4 326 aa9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Kcna6Q61923 529 aa9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Kif20bQ80WE4 1774 aaKnown RBP9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 PogkQ80TC5 607 aa9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Tex2Q6ZPJ0 1128 aaKnown RBP9.26□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Sipa1l2Q80TE4 1722 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 CastP51125 788 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Bcl2l13P59017 434 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 G3bp1P97855 465 aaKnown RBP9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Fbxo2Q80UW2 297 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 PaskQ8CEE6 1383 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Nrxn3Q6P9K9 1571 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Rfx1P48377 963 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Brinp3Q499E0 766 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Col14a1Q80X19 1797 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ppp6r1Q7TSI3 856 aa9.25□□□□□ -0.93
Bdnf-203ENSMUST00000111043 NalcnQ8BXR5 1738 aa9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Cdk12Q14AX6 1484 aaKnown RBP9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Arap3Q8R5G7 1538 aa9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Parp14Q2EMV9 1817 aa9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Kcnh5Q920E3 988 aa9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 HypkQ9CR41 129 aa9.24□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Gnai1B2RSH2 354 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Q3TQI7 289 aaKnown RBP9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Tbc1d32Q3URV1 1296 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Fez1Q8K0X8 392 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Adam1bQ8R534 806 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Gnai3Q9DC51 354 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ankrd50F7BE84 1390 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Brwd3A2AHJ4 1799 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 D430041D05RikF6ZGR6 1678 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Casq1O09165 405 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ggt6Q6PDE7 497 aa9.23□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Pdia4P08003 638 aaKnown RBP9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 IbspQ61711 324 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ccdc155Q80VJ8 648 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Gimap5Q8BWF2 308 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 CemipQ8BI06 1361 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ncapd2Q8K2Z4 1392 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 C5P06684 1680 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Arid4aF8VPQ2 1261 aaKnown RBP9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Plekhm2Q80TQ5 1018 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 OptnQ8K3K8 584 aa9.22□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Aifm3Q3TY86 605 aa9.21□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Ncoa4Q5U4H9 625 aa9.21□□□□□ -0.93
Bdnf-203ENSMUST00000111043 Vamp4O70480 141 aa9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 GorabQ8BRM2 368 aa9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 N4bp2F8VQG7 1678 aaKnown RBP9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Kif24Q6NWW5 1356 aa9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Maco1Q7TQE6 664 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms