RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Slc4a10Q5DTL9 1118 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Pabpn1lQ5XFR0 273 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Bcap29Q61334 240 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 HypkQ9CR41 129 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Six6os1Q9CTN5 574 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 IqcdQ9D3V1 458 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Taf7lQ9D3R9 471 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Apol7eQ3UZ24 369 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Dhx16G3X8X0 1044 aaKnown RBP7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Exoc6Q8R313 802 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc171E9Q1U1 1324 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gm21680A0A0G2JGR8 267 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Serpinb6bO08804 377 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Pip4k2bQ80XI4 416 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Nolc1E9Q5C9 702 aaKnown RBP7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cep57l1Q8VDS7 400 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Olr1Q9EQ09 363 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Spa17Q62252 149 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Nek5Q7TSC3 627 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Lrsam1Q80ZI6 727 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Chmp2aQ9DB34 222 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Clip2Q9Z0H8 1047 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Slc8a1P70414 970 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cage1Q5IR70 849 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Trim35Q8C006 501 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 EnahQ03173 802 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ppp6r1Q7TSI3 856 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gtf2e1Q9D0D5 440 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 NinlQ6ZQ12 1394 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc40Q8BI79 1192 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 ImpactO55091 318 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 Krt8P11679 490 aaKnown RBP7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 SlmapQ3URD3 845 aa7.07□□□□□ -1.28
Vcan-203ENSMUST00000109546 PogkQ80TC5 607 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 E9QMW4 1145 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tbc1d31Q6NXY1 996 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Bms1Q6PGF5 1284 aaKnown RBP7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc150Q8CDI7 1110 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc14Q8K2J4 934 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Vps37cQ8R105 352 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Prr16A3KMN5 304 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Trim25Q61510 634 aaKnown RBP7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Atp6v1aP50516 617 aaKnown RBP7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Clasp2Q8BRT1 1286 aaKnown RBP7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Prl7d1P04769 244 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gm28510A0A087WP28 240 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 GmnnO88513 206 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Luc7l2Q7TNC4 392 aaKnown RBP7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ebag9Q9D0V7 213 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gcc1Q9D4H2 778 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cib2Q9Z309 187 aa7.06□□□□□ -1.28
Vcan-203ENSMUST00000109546 Eif3dO70194 548 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Dync1i2O88487 612 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Mum1l1Q4VA55 681 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Nuf2Q99P69 463 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Zfp42P22227 288 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Eif5P59325 429 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Vps41Q5KU39 853 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 NexnQ7TPW1 607 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 SfpqQ8VIJ6 699 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Noc2lQ9WV70 747 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Usp48Q3V0C5 1052 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Smarcc2Q6PDG5 1213 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Vps36Q91XD6 386 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ttc4Q8R3H9 386 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Sclt1G5E861 688 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Specc1Q5SXY1 1067 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Slc4a8Q8JZR6 1089 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Mgea5Q9EQQ9 916 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Zkscan2G3X952 960 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Fyb1O35601 819 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Cplx4Q80WM3 160 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Fermt1P59113 677 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 FerP70451 823 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Caprin2Q05A80 1031 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Secisbp2lQ6A098 1086 aaKnown RBP7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Q9D9S1 216 aa7.05□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gsdma3Q5Y4Y6 464 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Baz1bQ9Z277 1479 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Atp2a2O55143 1044 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 MycbpQ9EQS3 103 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Rsph3bQ9DA80 389 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Uso1Q9Z1Z0 959 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gnl3lQ6PGG6 577 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Maco1Q7TQE6 664 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Kif5aP33175 1027 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Rundc1Q0VDN7 615 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Nop53Q8BK35 484 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Rhot2Q8JZN7 620 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Rufy3Q9D394 469 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Stk31Q99MW1 1018 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tacc3Q9JJ11 631 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Zeb2Q9R0G7 1215 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 HnrnpcQ9Z204 313 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Mybbp1aQ7TPV4 1344 aaKnown RBP7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tpd52Q62393 224 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Stxbp4Q9WV89 557 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 FanciQ8K368 1330 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Taok1Q5F2E8 1001 aa7.04□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gbp5Q8CFB4 590 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms