Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Gm25239-201ENSMUST00000174915 86 ntBASIC38.63■■■■□ 3.77
Lrsam1Q80ZI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Lrsam1Q80ZI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Lrsam1Q80ZI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Lrsam1Q80ZI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35■■■■□ 3.19
Lrsam1Q80ZI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
Lrsam1Q80ZI6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
Lrsam1Q80ZI6 Psd-208ENSMUST00000224556 2034 ntBASIC34.22■■■■□ 3.07
Lrsam1Q80ZI6 Gm24109-201ENSMUST00000175489 103 ntBASIC33.96■■■■□ 3.03
Lrsam1Q80ZI6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Lrsam1Q80ZI6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.27■■■□□ 2.92
Lrsam1Q80ZI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Lrsam1Q80ZI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Lrsam1Q80ZI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Lrsam1Q80ZI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Lrsam1Q80ZI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Lrsam1Q80ZI6 Gm15045-201ENSMUST00000117359 883 ntBASIC32.59■■■□□ 2.81
Lrsam1Q80ZI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Lrsam1Q80ZI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Lrsam1Q80ZI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Lrsam1Q80ZI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Lrsam1Q80ZI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.35■■■□□ 2.77
Lrsam1Q80ZI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Lrsam1Q80ZI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Lrsam1Q80ZI6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Lrsam1Q80ZI6 Gm23366-201ENSMUST00000175022 89 ntBASIC32.16■■■□□ 2.74
Lrsam1Q80ZI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Lrsam1Q80ZI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.98■■■□□ 2.71
Lrsam1Q80ZI6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Lrsam1Q80ZI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Lrsam1Q80ZI6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Lrsam1Q80ZI6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Lrsam1Q80ZI6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
Lrsam1Q80ZI6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Lrsam1Q80ZI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Lrsam1Q80ZI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Lrsam1Q80ZI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Lrsam1Q80ZI6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.49■■■□□ 2.63
Lrsam1Q80ZI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Lrsam1Q80ZI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Lrsam1Q80ZI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.45■■■□□ 2.63
Lrsam1Q80ZI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.24■■■□□ 2.59
Lrsam1Q80ZI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Lrsam1Q80ZI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Lrsam1Q80ZI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Lrsam1Q80ZI6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Lrsam1Q80ZI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.06■■■□□ 2.56
Lrsam1Q80ZI6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Lrsam1Q80ZI6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Lrsam1Q80ZI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Lrsam1Q80ZI6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.92■■■□□ 2.54
Lrsam1Q80ZI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.88■■■□□ 2.53
Lrsam1Q80ZI6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.85■■■□□ 2.53
Lrsam1Q80ZI6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Lrsam1Q80ZI6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Lrsam1Q80ZI6 Gm25238-201ENSMUST00000174914 89 ntBASIC30.79■■■□□ 2.52
Lrsam1Q80ZI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Lrsam1Q80ZI6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Lrsam1Q80ZI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.73■■■□□ 2.51
Lrsam1Q80ZI6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Lrsam1Q80ZI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
Lrsam1Q80ZI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.59■■■□□ 2.49
Lrsam1Q80ZI6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Lrsam1Q80ZI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Lrsam1Q80ZI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Lrsam1Q80ZI6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Lrsam1Q80ZI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Lrsam1Q80ZI6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Lrsam1Q80ZI6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Lrsam1Q80ZI6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Lrsam1Q80ZI6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
Lrsam1Q80ZI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Lrsam1Q80ZI6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Lrsam1Q80ZI6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
Lrsam1Q80ZI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Lrsam1Q80ZI6 Gm25262-201ENSMUST00000174934 133 ntBASIC29.98■■■□□ 2.39
Lrsam1Q80ZI6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Lrsam1Q80ZI6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.87■■■□□ 2.37
Lrsam1Q80ZI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Lrsam1Q80ZI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.81■■■□□ 2.36
Lrsam1Q80ZI6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Lrsam1Q80ZI6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
Lrsam1Q80ZI6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Lrsam1Q80ZI6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
Lrsam1Q80ZI6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Lrsam1Q80ZI6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.68■■■□□ 2.34
Lrsam1Q80ZI6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Lrsam1Q80ZI6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lrsam1Q80ZI6 Gm26115-201ENSMUST00000175605 87 ntBASIC29.61■■■□□ 2.33
Lrsam1Q80ZI6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Lrsam1Q80ZI6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Lrsam1Q80ZI6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.6■■■□□ 2.33
Lrsam1Q80ZI6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Lrsam1Q80ZI6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.54■■■□□ 2.32
Lrsam1Q80ZI6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lrsam1Q80ZI6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lrsam1Q80ZI6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.53■■■□□ 2.32
Lrsam1Q80ZI6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Lrsam1Q80ZI6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.43■■■□□ 2.3
Lrsam1Q80ZI6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms