RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Zeb2Q9R0G7 1215 aa24.82■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Cc2d1aQ8K1A6 943 aa24.82■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 4930572O03RikQ8C5Y0 211 aa24.81■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Klhdc4Q921I2 584 aa24.81■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Trim26Q99PN3 545 aa24.8■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Ggnbp2Q5SV77 696 aa24.8■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 U2surpQ6NV83 1029 aaKnown RBP24.8■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Polr3glQ8R0C0 218 aa24.8■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Prim1P20664 417 aa24.79■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Fam50bQ9WTJ8 334 aa24.77■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Vamp4O70480 141 aa24.77■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Ccdc60Q8C4J0 545 aa24.77■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Ggt6Q6PDE7 497 aa24.75■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Pdzd9Q9D9M4 266 aa24.75■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Phkg2Q9DB30 406 aa24.75■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Igsf1Q7TQA1 1317 aa24.75■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Foxp4Q9DBY0 795 aaKnown RBP24.74■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Apbb1Q9QXJ1 710 aa24.74■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Senp3Q9EP97 568 aaKnown RBP24.73■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 G3bp1P97855 465 aaKnown RBP24.71■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Shank2Q80Z38 1476 aa24.71■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Gm6268A2A3U9 297 aa24.7■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Eif3bQ8JZQ9 803 aaKnown RBP24.7■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Chmp7Q8R1T1 451 aa24.7■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Ssfa2Q922B9 1252 aa24.7■■□□□ 1.55
Ttc39a-203ENSMUST00000106619 Nkx2-3P97334 362 aa24.7■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 KarsQ99MN1 595 aaKnown RBP24.7■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Trim58Q5NCC9 485 aa24.69■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Speer4bQ9D9F7 267 aa24.69■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Cavin2Q63918 418 aaKnown RBP24.68■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Mbd3Q9Z2D8 285 aaKnown RBP24.68■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Plekhm2Q80TQ5 1018 aa24.67■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Akap11E9Q777 1895 aa24.67■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Nhsl1Q8CAF4 1587 aa24.67■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Emilin2Q8K482 1074 aa24.67■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 1700019A02RikA0A087WPV9 146 aa24.66■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Pibf1E9Q6K3 756 aa24.66■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Asic4Q7TNS7 539 aa24.66■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Msh6P54276 1358 aaKnown RBP24.66■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Nsd3Q6P2L6 1439 aa24.65■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Gm21680A0A0G2JGR8 267 aa24.65■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Cntnap1O54991 1385 aa24.65■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 NeflP08551 543 aa24.65■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Btbd11Q6GQW0 1109 aa24.65■■□□□ 1.54
Ttc39a-203ENSMUST00000106619 Kcnh4A2A5F7 1018 aa24.64■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Sema6bO54951 886 aa24.64■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Ccdc129Q14B48 1034 aa24.64■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Nyap1Q6PFX7 833 aa24.64■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Ubr2Q6WKZ8 1755 aa24.63■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Mst1rQ62190 1378 aa24.63■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Larp1Q6ZQ58 1072 aaKnown RBP24.63■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Pm20d1Q8C165 503 aa24.63■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Psrc1Q9D0P7 329 aa24.63■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Atf5O70191 283 aa24.62■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Pank1Q8K4K6 548 aa24.62■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Kat6bQ8BRB7 1872 aa24.61■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Lrp6O88572 1613 aa24.61■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Chl1P70232 1209 aa24.61■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Ginm1Q91WR6 327 aa24.61■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Fer1l6E0CZ42 1862 aa24.6■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Eif4a1P60843 406 aaKnown RBP24.6■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Q3TQI7 289 aaKnown RBP24.6■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Slc5a1Q8C3K6 665 aa24.6■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Col1a2Q01149 1372 aa24.6■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Gm21663A0A0G2JE01 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Gm7361D3Z6R1 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 5031410I06RikE9Q4E0 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Gm1979E9QAN3 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Gm5862K7N5V5 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Gm10220K7N660 267 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Ccdc155Q80VJ8 648 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Cyp2d12Q8BVD2 504 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Elp1Q7TT37 1333 aaKnown RBP24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Csrnp3P59055 597 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Tmco5bQ80X59 307 aa24.59■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Chpf2Q3UU43 768 aa24.58■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 MarsQ68FL6 902 aaKnown RBP24.58■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 MypopQ8R4U1 393 aa24.58■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 PappaQ8R4K8 1624 aa24.58■■□□□ 1.53
Ttc39a-203ENSMUST00000106619 Nectin2P32507 530 aa24.57■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Sik1Q60670 779 aa24.57■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Znf521Q6KAS7 1311 aa24.57■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Cacna1sQ02789 1880 aa24.56■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 InhbeO08717 350 aa24.56■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Q3UPC7 1272 aa24.56■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Aldh1l1Q8R0Y6 902 aa24.55■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Prkrip1Q9CWV6 186 aaKnown RBP24.55■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Dlg5E9Q9R9 1921 aa24.54■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Vps33bP59016 617 aa24.54■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Sf3b2Q3UJB0 878 aaKnown RBP24.54■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Ankrd23Q812A3 306 aa24.54■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Tnrc6cQ3UHC0 1690 aaKnown RBP24.53■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Rangap1P46061 589 aaKnown RBP24.53■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Kcnh8P59111 1102 aa24.52■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Eno4Q8C042 619 aa24.52■■□□□ 1.52
Ttc39a-203ENSMUST00000106619 Mast2Q60592 1734 aa24.51■■□□□ 1.51
Ttc39a-203ENSMUST00000106619 Exoc5Q3TPX4 708 aa24.51■■□□□ 1.51
Ttc39a-203ENSMUST00000106619 Nwd2Q6P5U7 1742 aa24.51■■□□□ 1.51
Ttc39a-203ENSMUST00000106619 Tnnt1O88346 262 aa24.5■■□□□ 1.51
Ttc39a-203ENSMUST00000106619 Ppp1r3fQ9JIG4 799 aa24.5■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms