RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 4930407I10RikD3Z5T8 1512 aa13.82□□□□□ -0.2
Trim55-201ENSMUST00000029139 Tpd52l1O54818 204 aa13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Klra3Q64329 266 aa13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Ccar1Q8CH18 1146 aaKnown RBP13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Bicd2Q921C5 820 aa13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Adgrl1Q80TR1 1466 aa13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Rimbp3Q3V0F0 1606 aa13.81□□□□□ -0.2
Trim55-201ENSMUST00000029139 Acbd5Q5XG73 508 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Fancd2Q80V62 1450 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Znf521Q6KAS7 1311 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Adgrb2Q8CGM1 1561 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Q4VA45 678 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Trak1Q6PD31 939 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Wdr60Q8C761 999 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Tbc1d8Q9Z1A9 1134 aa13.8□□□□□ -0.2
Trim55-201ENSMUST00000029139 Rnaseh1O70338 285 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Klra9Q2TJJ8 266 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Klra10Q9R1G6 266 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Kdm5cP41230 1554 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Adcy5P84309 1262 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Kcnb1Q03717 857 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Rbm33Q9CXK9 1231 aaKnown RBP13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Ipo7Q9EPL8 1038 aaKnown RBP13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Dip2cE9PWR4 1557 aa13.79□□□□□ -0.2
Trim55-201ENSMUST00000029139 Zscan29E9Q5B4 869 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Cfdp1O88271 295 aaKnown RBP13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 CastP51125 788 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Trim58Q5NCC9 485 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Sugp2Q8CH09 1067 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Creld2Q9CYA0 350 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Gm1043A0A140LJC2 1431 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Usp47Q8BY87 1376 aa13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Rprd2Q6NXI6 1469 aaKnown RBP13.78□□□□□ -0.2
Trim55-201ENSMUST00000029139 Cux1P53564 1515 aa13.77□□□□□ -0.2
Trim55-201ENSMUST00000029139 Mroh2bQ7M6Y6 1581 aa13.77□□□□□ -0.2
Trim55-201ENSMUST00000029139 Dmrtc1Q9D9R7 182 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Cspp1B2RX88 1205 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Gm6588E9Q3K0 461 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Sema3fO88632 785 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Plcb3P51432 1234 aaKnown RBP13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Vps37dQ810I0 261 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Zkscan1Q8BGS3 561 aaKnown RBP13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 CrbnQ8C7D2 445 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Phc3Q8CHP6 981 aa13.77□□□□□ -0.21
Trim55-201ENSMUST00000029139 Rock1P70335 1354 aa13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 Rad50P70388 1312 aa13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 Recql4Q75NR7 1216 aaKnown RBP13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 Otud6bQ8K2H2 294 aa13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 GzmnQ920S1 248 aa13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 Ranbp1P34022 203 aaKnown RBP13.76□□□□□ -0.21
Trim55-201ENSMUST00000029139 Erich3F6QRE9 1637 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Duxf3A0A0N4SV92 674 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 HalP35492 657 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Ccdc40Q8BI79 1192 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Pes1Q9EQ61 584 aaKnown RBP13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Rsph10bE9PYQ0 876 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 GclcP97494 637 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Zcwpw1Q6IR42 630 aa13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 Synpo2Q91YE8 1087 aaKnown RBP13.75□□□□□ -0.21
Trim55-201ENSMUST00000029139 WrnO09053 1401 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Naip6Q9JIB6 1403 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 CenpjQ569L8 1344 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Kcnf1Q7TSH7 493 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Trpm1Q2TV84 1622 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Tbc1d30Q69ZT9 766 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Sugt1Q9CX34 336 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Mdc1Q5PSV9 1707 aa13.74□□□□□ -0.21
Trim55-201ENSMUST00000029139 Dennd4bQ3U1Y4 1499 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Elp1Q7TT37 1333 aaKnown RBP13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Znf653Q6YND2 615 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Hecw1Q8K4P8 1604 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Mcm5P49718 733 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Tpm1P58771 284 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Sh3gl3Q62421 347 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Oxsr1Q6P9R2 527 aa13.73□□□□□ -0.21
Trim55-201ENSMUST00000029139 Wwc1Q5SXA9 1104 aa13.72□□□□□ -0.21
Trim55-201ENSMUST00000029139 Adck5Q80V03 582 aa13.72□□□□□ -0.21
Trim55-201ENSMUST00000029139 WdpcpQ8C456 722 aa13.72□□□□□ -0.21
Trim55-201ENSMUST00000029139 Lmo7E9PYF4 1699 aaKnown RBP13.72□□□□□ -0.21
Trim55-201ENSMUST00000029139 Carmil1Q6EDY6 1374 aa13.71□□□□□ -0.21
Trim55-201ENSMUST00000029139 Dapk1Q80YE7 1442 aa13.71□□□□□ -0.21
Trim55-201ENSMUST00000029139 Sf3b2Q3UJB0 878 aaKnown RBP13.71□□□□□ -0.21
Trim55-201ENSMUST00000029139 Smc4Q8CG47 1286 aa13.71□□□□□ -0.21
Trim55-201ENSMUST00000029139 Slc5a4aQ9ET37 656 aa13.71□□□□□ -0.21
Trim55-201ENSMUST00000029139 Mroh2aD3Z750 1679 aa13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Smarce1O54941 411 aaKnown RBP13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Paxbp1P58501 919 aa13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ift57Q8BXG3 429 aa13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Pank1Q8K4K6 548 aa13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Plagl1Q9JLQ4 704 aa13.71□□□□□ -0.22
Trim55-201ENSMUST00000029139 Spag5Q7TME2 1165 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Dpf1Q9QX66 387 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 RargP18911 458 aaKnown RBP13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Impdh2P24547 514 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Nap1l2P51860 460 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Zranb1Q7M760 708 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Tmx1Q8VBT0 278 aa13.7□□□□□ -0.22
Trim55-201ENSMUST00000029139 Arhgap31A6X8Z5 1425 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Mphosph9A6H5Y1 991 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ifi35Q9D8C4 286 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms