RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 AKAP13Q12802 2813 aa11.71□□□□□ -0.54
RAB5C-204ENST00000547517 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.54
RAB5C-204ENST00000547517 CHD8Q9HCK8 2581 aa11.71□□□□□ -0.54
RAB5C-204ENST00000547517 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 KMT2BQ9UMN6 2715 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 C2orf81A6NN90 581 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 E7EVH7 732 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 CASC3O15234 703 aaKnown RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 CRTAMO95727 393 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 AP2A1O95782 977 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 MT-CO3P00414 261 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ETS1P14921 441 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 LPOP22079 712 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 LMAN1P49257 510 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF140P52738 457 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 LRP8Q14114 963 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 SEPT6Q14141 434 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 CHRNA6Q15825 494 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ST3GAL2Q16842 350 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 DENND5AQ6IQ26 1287 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 CHST15Q7LFX5 561 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 DCBLD1Q8N8Z6 715 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 GLIS1Q8NBF1 620 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 OR4K2Q8NGD2 314 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 MAIP1Q8WWC4 291 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 PATE1Q8WXA2 126 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ZCCHC14Q8WYQ9 949 aaKnown RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 VPS35Q96QK1 796 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 RMI1Q9H9A7 625 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 FEZ2Q9UHY8 353 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 JRKLQ9Y4A0 524 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 KCTD3Q9Y597 815 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 MYLKQ15746 1914 aa11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
RAB5C-204ENST00000547517 ACACBO00763 2458 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 BPTFQ12830 3046 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 USP27XA6NNY8 438 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 GAPDHSO14556 408 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-204ENST00000547517 GRID2O43424 1007 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 KIF5CO60282 957 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 NUAK1O60285 661 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A9O60656 530 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 CSO75390 466 aaKnown RBP11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ECEL1O95672 775 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 PROS1P07225 676 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ZSCAN5DPP0CG00 497 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 TPH1P17752 444 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A6P19224 532 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A1P22309 533 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A4P22310 534 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A3P35503 534 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A5P35504 534 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 FDFT1P37268 417 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 TMPRSS15P98073 1019 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 BIRC2Q13490 618 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 PEX6Q13608 980 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ITGA9Q13797 1035 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 GTF2H3Q13889 308 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 POU6F1Q14863 301 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 CCNG2Q16589 344 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 CERCAMQ5T4B2 595 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 CDCP2Q5VXM1 449 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 OGFOD3Q6PK18 319 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 GSTA5Q7RTV2 222 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 Q8N9G6 341 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-204ENST00000547517 OR13C4Q8NGS5 318 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 BRSK1Q8TDC3 778 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 MS4A14Q96JA4 679 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 DEPDC7Q96QD5 511 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 OSGEPL1Q9H4B0 414 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ARNT2Q9HBZ2 717 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 RAB6BQ9NRW1 208 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 PAK5Q9P286 719 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 ZKSCAN5Q9Y2L8 839 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 PCDHB1Q9Y5F3 818 aa11.69□□□□□ -0.54
RAB5C-204ENST00000547517 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 CCDC78A2IDD5 438 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TMEM8BA6NDV4 472 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TRABD2BA6NFA1 517 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 GPR89AB7ZAQ6 455 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 CCL22O00626 93 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 PSMD3O43242 534 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 VEGFDO43915 354 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 SNX2O60749 519 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 CDK14O94921 469 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms