RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 D6RAR5 112 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ATXN7O15265 892 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 MFSD11O43934 449 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 NOBOXO60393 691 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 MTA2O94776 668 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ZRANB2O95218 330 aaKnown RBP eCLIP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 IPO7O95373 1038 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CLDN7O95471 211 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ECEL1O95672 775 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 JCHAINP01591 159 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CELA2BP08218 269 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 PDHA1P08559 390 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CD48P09326 243 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 GPR89BP0CG08 455 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 UGT1A5P35504 534 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ADCY8P40145 1251 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CETN2P41208 172 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ACTR1BP42025 376 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 STC1P52823 247 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 TAS2R40P59535 323 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ACTR1AP61163 376 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 GPLD1P80108 840 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 B4GALNT1Q00973 533 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CTBSQ01459 385 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 DSC2Q02487 901 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ZFP36L1Q07352 338 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 PPIDQ08752 370 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 SQSTM1Q13501 440 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 TRA2AQ13595 282 aaKnown RBP eCLIP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 COL9A2Q14055 689 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 TCEA2Q15560 299 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 SLC14A2Q15849 920 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ASTE1Q2TB18 679 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 MAP9Q49MG5 647 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 PHF19Q5T6S3 580 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ZDHHC20Q5W0Z9 365 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 LRRC66Q68CR7 880 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CLEC14AQ86T13 490 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 JAMLQ86YT9 394 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 GALNT13Q8IUC8 556 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 VSTM4Q8IW00 320 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 OR10G6Q8NH81 332 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 SNRNP27Q8WVK2 155 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 PDXPQ96GD0 296 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 SCARF2Q96GP6 870 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 OR2M4Q96R27 311 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CCNL2Q96S94 520 aaPredicted RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 TDRD1Q9BXT4 1180 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ZFYVE1Q9HBF4 777 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 MAGEE1Q9HCI5 957 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ASCL3Q9NQ33 180 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 ABHD10Q9NUJ1 306 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
FOXN3-205ENST00000553904 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 DTLQ9NZJ0 730 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 VPS18Q9P253 973 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 RNF215Q9Y6U7 377 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 LAMA1P25391 3075 aa6.49□□□□□ -1.37
FOXN3-205ENST00000553904 CACNA1BQ00975 2339 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 KIR2DS5A0A0G2JLQ3 304 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 A0A0G2JNG1 304 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 A0A1W2PQM1 296 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 KIR2DS3K7RE56 304 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 HGSO14964 777 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 B4GAT1O43505 415 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SPOPO43791 374 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 KCNJ13O60928 360 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 ZNF189O75820 626 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC25A14O95258 325 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 MAP3K6O95382 1288 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 EPOP01588 193 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SFTPCP11686 197 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 GM2AP17900 193 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 VCLP18206 1134 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 LHCGRP22888 699 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC5A2P31639 672 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 CSTF2P33240 577 aaKnown RBP eCLIP6.48□□□□□ -1.372e-8■■■■■ 36.2
FOXN3-205ENST00000553904 CYLC1P35663 651 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 CD86P42081 329 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SPINT3P49223 89 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 IFI35P80217 286 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 GBE1Q04446 702 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 CDK18Q07002 472 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC10A2Q12908 348 aaPredicted RBP6.48□□□□□ -1.37
FOXN3-205ENST00000553904 KIR2DS5Q14953 304 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 AMZ1Q400G9 498 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 PYCR3Q53H96 274 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 TEX44Q53QW1 395 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 ARHGAP40Q5TG30 622 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 PDPK2PQ6A1A2 396 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC9A4Q6AI14 798 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 TMEM71Q6P5X7 295 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC30A9Q6PML9 568 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 USP53Q70EK8 1073 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SPRED1Q7Z699 444 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 SLC9B2Q86UD5 537 aa6.48□□□□□ -1.37
FOXN3-205ENST00000553904 TSPAN33Q86UF1 283 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms