RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 GOLGA4Q13439 2230 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 FAM25AB3EWG3 89 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 FAM25CB3EWG5 89 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 FAM25GB3EWG6 89 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TIPRLO75663 272 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 C1RP00736 705 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 MAPKAPK2P49137 400 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 CA9Q16790 459 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 MFSD4BQ5TF39 518 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 CHMP1BQ7LBR1 199 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 MYDGFQ969H8 173 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 OXCT2Q9BYC2 517 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 RAB26Q9ULW5 256 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 DMTF1Q9Y222 760 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 A0A0G2JLL6 359 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 YJEFN3A6XGL0 299 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 NPHS1O60500 1241 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TSPAN19P0C672 248 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TACR2P21452 398 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 LMO2P25791 158 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 IL1R2P27930 398 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 AP5B1Q2VPB7 878 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 LSM12Q3MHD2 195 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 PRRT2Q7Z6L0 340 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 NOL11Q9H8H0 719 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 PCDH12Q9NPG4 1184 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 KIAA1522Q9P206 1035 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 COL1A1P02452 1464 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 KCNU1A8MYU2 1149 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 MT-CYBP00156 380 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 CCNA2P20248 432 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 NMBRP28336 390 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 GPR1P46091 355 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 TAS2R39P59534 338 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 DSC2Q02487 901 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 ANXA8L1Q5VT79 327 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 CRYBG2Q8N1P7 616 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
TRAPPC11-201ENST00000334690 ASNA1O43681 348 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 OR4Q2P0C623 313 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 SMPD1P17405 629 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 NDUFV1P49821 464 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 TCEAL1Q15170 157 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 RGS21Q2M5E4 152 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 TCAIMQ8N3R3 496 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 PHF10Q8WUB8 498 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 USP7Q93009 1102 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 Q96MT0 163 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 CORO1BQ9BR76 489 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 REXO4Q9GZR2 422 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 KCTD5Q9NXV2 234 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 GNEQ9Y223 722 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 GSTK1Q9Y2Q3 226 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 POLR3HQ9Y535 204 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 KLRG2A4D1S0 409 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 PEX10O60683 326 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 STX11O75558 287 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 CYP7B1O75881 506 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 LYNP07948 512 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 VAV1P15498 845 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 IDH3AP50213 366 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 GNA12Q03113 381 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 SH3PXD2AQ5TCZ1 1133 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZDHHC20Q5W0Z9 365 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZNF540Q8NDQ6 660 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 CIB1Q99828 191 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 SERHL2Q9H4I8 314 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 SERHLQ9NQF3 203 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 IKZF3Q9UKT9 509 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZNF541Q9H0D2 1346 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 LOC100506127A0A0U1RQW1 187 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 SLC22A2O15244 555 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 GPR21Q99679 349 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 BRD9Q9H8M2 597 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 PNPLA8Q9NP80 782 aa17.05■□□□□ 0.32
TRAPPC11-201ENST00000334690 ITGADQ13349 1161 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 LIN52Q52LA3 116 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 MTX3Q5HYI7 312 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 FGD2Q7Z6J4 655 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 CXorf40AQ8TE69 158 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 ASZ1Q8WWH4 475 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 VPS35Q96QK1 796 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 VPS4AQ9UN37 437 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 ZNF232Q9UNY5 417 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 C1QTNF3-AMACRE9PGA6 284 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 STK16O75716 305 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 GPIP06744 558 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 GLYATQ6IB77 296 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 KBTBD8Q8NFY9 601 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 PPM1MQ96MI6 270 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 SAMD4AQ9UPU9 718 aaKnown RBP17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 MYH2Q9UKX2 1941 aa17.04■□□□□ 0.32
TRAPPC11-201ENST00000334690 A0A1B0GVM2 712 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms