RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MLH1P40692 756 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 CPA2P48052 419 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 BLKP51451 505 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 EFNA5P52803 228 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 RPL7AP62424 266 aaKnown RBP5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 CYP4A11Q02928 519 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 ME3Q16798 604 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 EDRF1Q3B7T1 1238 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 TTLL5Q6EMB2 1281 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 C16orf54Q6UWD8 224 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 ADGRF4Q8IZF3 695 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 CCDC89Q8N998 374 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 PIMREGQ9BSJ6 248 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 EIF2B3Q9NR50 452 aaKnown RBP5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 BABAM1Q9NWV8 329 aa5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 MKI67P46013 3256 aaKnown RBP5.91□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARHGAP10A1A4S6 786 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 LINC01548A6NM66 108 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 SEC14L2O76054 403 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 UFL1O94874 794 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 CCNDBP1O95273 360 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 WNT1P04628 370 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 CD63P08962 238 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 RARSP54136 660 aaKnown RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 ARSFP54793 590 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 PROK1P58294 105 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 HSF1Q00613 529 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 EARS2Q5JPH6 523 aaKnown RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 KLHL24Q6TFL4 600 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 ZNF782Q6ZMW2 699 aaPredicted RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 CCDC129Q6ZRS4 1044 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 WDR5BQ86VZ2 330 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 BOLLQ8N9W6 283 aaKnown RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 AGBL3Q8NEM8 1001 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 SEMA6DQ8NFY4 1073 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 CADM4Q8NFZ8 388 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 BCAS4Q8TDM0 211 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 GDPD5Q8WTR4 605 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 HDAC7Q8WUI4 952 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 USP6NLQ92738 828 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 RSRC1Q96IZ7 334 aaKnown RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 AGAP2Q99490 1192 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 SCNM1Q9BWG6 230 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 MUC13Q9H3R2 512 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 ACTR5Q9H9F9 607 aaPredicted RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 MYOZ2Q9NPC6 264 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 SEPT11Q9NVA2 429 aaKnown RBP5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 HAUS2Q9NVX0 235 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 NSMCE4AQ9NXX6 385 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 TBC1D29Q9UFV1 150 aa5.9□□□□□ -1.46
RNU4-39P-201ENST00000362455 CASP8AP2Q9UKL3 1982 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 DPPA5A6NC42 116 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 AP3D1O14617 1153 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 FSHBP01225 129 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF853P0CG23 659 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 NFKBIAP25963 317 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 HOXD13P35453 343 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 CPOXP36551 454 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 FKBP1BP68106 108 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 TMEM115Q12893 351 aaPredicted RBP5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 SYTL3Q4VX76 610 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 SERTAD4-AS1Q5TG53 156 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 CDC73Q6P1J9 531 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 SLC46A3Q7Z3Q1 461 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZBED3Q96IU2 234 aaPredicted RBP5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 SCAND2PQ9GZW5 306 aaPredicted RBP5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 PCED1AQ9H1Q7 454 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 PDGFCQ9NRA1 345 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 LIMA1Q9UHB6 759 aaKnown RBP5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 NRBP1Q9UHY1 535 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 VPS28Q9UK41 221 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 UTS2RQ9UKP6 389 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 PCDHGB5Q9Y5G0 923 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 KCNE2Q9Y6J6 123 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF609O15014 1411 aa5.89□□□□□ -1.47
RNU4-39P-201ENST00000362455 KDM3BQ7LBC6 1761 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 KAT6AQ92794 2004 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 MANSC4A6NHS7 340 aaPredicted RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 GTPBP1O00178 669 aaKnown RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 RHODO00212 210 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 CYR61O00622 381 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 UGDHO60701 494 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 LCKP06239 509 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 IGKV5-2P06315 115 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 ALOX12P18054 663 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 POU1F1P28069 291 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 CIITAP33076 1130 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 PBX3P40426 434 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 CFHR1Q03591 330 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 PMPCAQ10713 525 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 MED22Q15528 200 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 TAF11Q15544 211 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 PKN2Q16513 984 aaKnown RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 FBXO46Q6PJ61 603 aaPredicted RBP5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF66Q6ZN08 573 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
RNU4-39P-201ENST00000362455 IKBIPQ70UQ0 350 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms