RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ECHDC3Q96DC8 303 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 DEPDC7Q96QD5 511 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 CLPBQ9H078 707 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 SYNDIG1Q9H7V2 258 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 SCUBE2Q9NQ36 999 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 SIRPGQ9P1W8 387 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 CTTNBP2NLQ9P2B4 639 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 SALL4Q9UJQ4 1053 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 PCDHGC4Q9Y5F7 938 aa17.28■□□□□ 0.36
GPHN-211ENST00000556020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.27■□□□□ 0.36
GPHN-211ENST00000556020 TMEM110-MUSTN1A8MSY1 372 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 LMO7DNF2Z398 122 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 TPP1O14773 563 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 YY2O15391 372 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 TLX3O43711 291 aaPredicted RBP17.27■□□□□ 0.36
GPHN-211ENST00000556020 CSO75390 466 aaKnown RBP17.27■□□□□ 0.36
GPHN-211ENST00000556020 RECQL5O94762 991 aaPredicted RBP17.27■□□□□ 0.36
GPHN-211ENST00000556020 RASGRP1O95267 797 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 TPM3P06753 285 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 CD48P09326 243 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 SERPINB6P35237 376 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 PEX5P50542 639 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 BLKP51451 505 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 RTP5Q14D33 572 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 ACOX1Q15067 660 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 DENND2CQ68D51 928 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 LIPIQ6XZB0 460 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 DPPA4Q7L190 304 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 PDZD3Q86UT5 571 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 SLC35F3Q8IY50 421 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 BBS5Q8N3I7 341 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 GLMNQ92990 594 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 CRELD1Q96HD1 420 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 WDR92Q96MX6 357 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 NCKIPSDQ9NZQ3 722 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 GULP1Q9UBP9 304 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 B4GALT6Q9UBX8 382 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 KLQ9UEF7 1012 aa17.27■□□□□ 0.36
GPHN-211ENST00000556020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.27■□□□□ 0.36
GPHN-211ENST00000556020 LAMA5O15230 3695 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 TRAFD1O14545 582 aaPredicted RBP17.26■□□□□ 0.35
GPHN-211ENST00000556020 MAFKO60675 156 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 USP12O75317 370 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 PEX11BO96011 259 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 CPP00450 1065 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 TGM2P21980 687 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
GPHN-211ENST00000556020 MMP13P45452 471 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 RPIAP49247 311 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 HK3P52790 923 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 SRP54P61011 504 aaKnown RBP17.26■□□□□ 0.35
GPHN-211ENST00000556020 MTM1Q13496 603 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 ELOCQ15369 112 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 HADHQ16836 314 aaKnown RBP17.26■□□□□ 0.35
GPHN-211ENST00000556020 ATP13A4Q4VNC1 1196 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 PERM1Q5SV97 790 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 C6orf132Q5T0Z8 1188 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 FSTL5Q8N475 847 aaPredicted RBP17.26■□□□□ 0.35
GPHN-211ENST00000556020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
GPHN-211ENST00000556020 PCDH19Q8TAB3 1148 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 NUDCD1Q96RS6 583 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 BOCQ9BWV1 1114 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 PACSIN1Q9BY11 444 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 NOD2Q9HC29 1040 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 ASXL3Q9C0F0 2248 aa17.26■□□□□ 0.35
GPHN-211ENST00000556020 CACNB4O00305 520 aaPredicted RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 MFSD11O43934 449 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 MAP3K6O95382 1288 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 MPOP05164 745 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 HOXB3P14651 431 aaPredicted RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 ITPKBP27987 946 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 ITKQ08881 620 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 TRAF2Q12933 501 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 AGERQ15109 404 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 MARC1Q5VT66 337 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 ESRP1Q6NXG1 681 aaKnown RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 ATL2Q8NHH9 583 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 SCG3Q8WXD2 468 aaKnown RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 CTNNBL1Q8WYA6 563 aaPredicted RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 FUBP1Q96AE4 644 aaKnown RBP17.25■□□□□ 0.35
GPHN-211ENST00000556020 PDXPQ96GD0 296 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 NT5MQ9NPB1 228 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 MOSPD1Q9UJG1 213 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 RP1P56715 2156 aa17.25■□□□□ 0.35
GPHN-211ENST00000556020 A0A087WV48 116 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 EME2A4GXA9 379 aaPredicted RBP17.24■□□□□ 0.35
GPHN-211ENST00000556020 CFAP69A5D8W1 941 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 CASC3O15234 703 aaKnown RBP17.24■□□□□ 0.35
GPHN-211ENST00000556020 TNFP01375 233 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 ALPIP09923 528 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 GM2AP17900 193 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 CR2P20023 1033 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 IL4RP24394 825 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 ACTN2P35609 894 aa17.24■□□□□ 0.35
GPHN-211ENST00000556020 ABCG1P45844 678 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms